Detailed information NTG0796315

Bioinformatically predicted

Overview

• Name: pilU
• Type: Machinery gene
• Locus tag: PWO49_RS13515
• Genome accession: NZ_CP118916
• Coordinates: 2996432..2997562 (-)
• Length: 376 a.a.
• NCBI ID: WP_210797612.1
• Uniprot ID: -
• Organism: Pseudoalteromonas ostreae strain hOe-124
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2991432..3002562

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
PWO49_RS13485	-	2992154..2992627 (+)	474	WP_210797617.1	hypothetical protein	-
PWO49_RS13490	rsmE	2992733..2993467 (+)	735	WP_210797616.1	16S rRNA (uracil(1498)-N(3))-methyltransferase	-
PWO49_RS13495	gshB	2993522..2994475 (+)	954	WP_210797615.1	glutathione synthase	-
PWO49_RS13500	-	2994503..2995060 (+)	558	WP_210797614.1	YqgE/AlgH family protein	-
PWO49_RS13505	ruvX	2995095..2995541 (+)	447	WP_210797613.1	Holliday junction resolvase RuvX	-
PWO49_RS13510	-	2995504..2996430 (-)	927	WP_215909092.1	hypothetical protein	-
PWO49_RS13515	pilU	2996432..2997562 (-)	1131	WP_210797612.1	PilT/PilU family type 4a pilus ATPase	Machinery gene
PWO49_RS13520	pilT	2997582..2998622 (-)	1041	WP_210797611.1	type IV pilus twitching motility protein PilT	Machinery gene
PWO49_RS13525	-	2998625..2999338 (+)	714	WP_275074492.1	YggS family pyridoxal phosphate-dependent enzyme	-
PWO49_RS13530	proC	2999354..3000175 (+)	822	WP_210797609.1	pyrroline-5-carboxylate reductase	-
PWO49_RS13535	-	3000233..3000766 (+)	534	WP_210797608.1	YggT family protein	-
PWO49_RS13540	-	3000818..3001261 (+)	444	WP_210797607.1	DUF4426 domain-containing protein	-
PWO49_RS13545	-	3001265..3001864 (+)	600	WP_210797606.1	XTP/dITP diphosphatase	-

Sequence

Protein

• Length: 376 a.a.
• Molecular weight: 41636.70 Da
• Isoelectric Point: 6.1358

>NTDB_id=796315 PWO49_RS13515 WP_210797612.1 2996432..2997562(-) (pilU) [Pseudoalteromonas ostreae strain hOe-124]
MTHSLDYFLHLMIEKQGSDLFVSSQLPVSAKINGELIALGDDKISDEQSLQLVESAMSEKQKAEFHNTKECNFAIATEEG
RFRISAFWQRDCAGMVIRRIVTQIPDVAELGLPSTLTDVIMAKRGLVLFVGGTGTGKSTSLAALLGYRNRNQRGHILTIE
DPIEFVHEHRKSIITQREVGLDTESFEAALKSSLRQAPDVILIGEIRSQETMEYALSFAETGHLCVATLHANNANQAIDR
IMHLVPKEKHDKLKYDLSLNLRAIIAQQLVPTADGNGRVAAIEILLNTPIVGELIKKGDIGGIKEAMAKAKDMGMQTFDQ
ALFELYKQQRINYADALHYADSPNDLRLMIKLRNNEQQGAGFLQGVTIDGLEPKGQ

Nucleotide

• Length: 1131 bp

>NTDB_id=796315 PWO49_RS13515 WP_210797612.1 2996432..2997562(-) (pilU) [Pseudoalteromonas ostreae strain hOe-124]
ATGACACATTCTCTTGATTACTTTTTACATTTAATGATTGAAAAGCAAGGTTCGGATTTATTTGTATCAAGCCAATTGCC
GGTCAGCGCAAAGATTAATGGCGAACTGATAGCATTGGGCGACGACAAAATATCAGACGAGCAGTCGCTGCAGTTAGTTG
AATCAGCGATGAGCGAAAAACAAAAAGCAGAGTTTCATAATACCAAAGAATGTAACTTTGCGATTGCCACCGAGGAAGGG
CGCTTTAGGATCTCGGCATTTTGGCAACGTGACTGTGCGGGTATGGTTATTCGCCGTATTGTTACGCAAATTCCTGATGT
TGCTGAGCTTGGTCTACCTTCGACATTGACCGATGTGATCATGGCTAAACGTGGTTTAGTGCTGTTTGTCGGTGGTACTG
GCACAGGTAAATCAACGTCGTTAGCTGCATTGTTGGGTTACCGTAACCGTAATCAACGCGGCCATATTTTGACCATCGAA
GATCCGATTGAATTTGTTCATGAACATCGCAAAAGTATTATTACTCAGCGTGAAGTTGGCTTAGATACGGAAAGTTTTGA
AGCGGCGTTAAAAAGCTCATTACGCCAAGCGCCCGATGTAATTTTAATTGGTGAAATACGTTCGCAAGAGACCATGGAAT
ACGCACTTAGTTTTGCTGAAACAGGTCATTTATGTGTTGCTACTTTGCATGCCAATAACGCTAACCAAGCAATTGACCGT
ATTATGCATTTAGTGCCTAAAGAAAAGCACGATAAGCTTAAATATGATCTATCTTTAAATCTACGCGCGATCATTGCCCA
GCAGTTAGTGCCTACCGCAGATGGCAATGGCCGTGTCGCTGCTATCGAAATTTTGTTAAACACCCCAATTGTTGGCGAAC
TTATCAAAAAAGGGGATATTGGCGGTATTAAAGAAGCGATGGCTAAAGCGAAAGACATGGGGATGCAAACCTTTGATCAG
GCGCTCTTTGAGCTTTATAAACAGCAGCGAATTAACTATGCTGATGCATTACATTATGCTGATTCACCAAATGATTTACG
TTTGATGATTAAGCTGAGAAATAACGAGCAGCAAGGAGCTGGTTTTTTACAGGGAGTGACCATTGACGGGTTAGAGCCTA
AAGGTCAATAA

Domains

Predicted by InterproScan.

• Type II/IV secretion system protein (T2SSE) (48-272)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilU	Pseudomonas stutzeri DSM 10701	59.026	92.819	0.548
pilU	Acinetobacter baylyi ADP1	55.376	98.936	0.548
pilU	Vibrio cholerae strain A1552	55.616	97.074	0.54
pilT	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	43.407	96.809	0.42