Detailed information    

insolico Bioinformatically predicted

Overview


Name   htrA   Type   Regulator
Locus tag   PWA41_RS12445 Genome accession   NZ_CP118755
Coordinates   2560347..2561645 (+) Length   432 a.a.
NCBI ID   WP_338423494.1    Uniprot ID   -
Organism   Enterococcus faecalis strain W5     
Function   repress competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 2555347..2566645
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  PWA41_RS12440 (PWA41_12440) rlmH 2559467..2559946 (-) 480 WP_002355021.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  PWA41_RS12445 (PWA41_12445) htrA 2560347..2561645 (+) 1299 WP_338423494.1 trypsin-like peptidase domain-containing protein Regulator
  PWA41_RS12450 (PWA41_12450) ytpR 2561692..2562312 (-) 621 WP_002407823.1 YtpR family tRNA-binding protein -
  PWA41_RS12455 (PWA41_12455) - 2562523..2562978 (-) 456 WP_002385249.1 universal stress protein -
  PWA41_RS12460 (PWA41_12460) - 2563126..2563440 (-) 315 WP_002355015.1 thioredoxin family protein -
  PWA41_RS12465 (PWA41_12465) pepA 2563452..2564528 (-) 1077 WP_002355013.1 glutamyl aminopeptidase -
  PWA41_RS12470 (PWA41_12470) - 2564835..2565176 (+) 342 WP_002355012.1 PepSY domain-containing protein -

Sequence


Protein


Download         Length: 432 a.a.        Molecular weight: 44889.00 Da        Isoelectric Point: 4.9968

>NTDB_id=795009 PWA41_RS12445 WP_338423494.1 2560347..2561645(+) (htrA) [Enterococcus faecalis strain W5]
MQRKDVTPNSDKKSLLQKFGIGLAGGLLGGALILGGAYSGIIPTPNGGNNAATTTSTNHGDTKVSNVSYNVSSDVTKAVK
KVQNSVVSVINMQSASNNSSADDPFGGLFGGNEGTQDSSGNNDNDLEAASEGSGVIYKKDGKTAYVVTNNHVVDKAQGLE
VVLSDGTKVKGELVGTDAYTDLAVIKISSDKVNQVAEFGNSSKITVGEPAIAIGSPLGSDYANSVTQGIISSVNRNITNK
NESGETININAIQTDAAINPGNSGGPLINIEGQVIGINSVKIVQSTSQVSVEGMGFAIPSNDVVNIINQLEKDGKVTRPA
LGITMSDLTGISSQQQEQILKIPASVKTGVVVRGVEAATPAEKAGLEKYDVITKVDGQDVSSTTDLQSALYKKKVGDKME
VTYYRGSKEMKATIDLTIDKSALTQQNNRSNQ

Nucleotide


Download         Length: 1299 bp        

>NTDB_id=795009 PWA41_RS12445 WP_338423494.1 2560347..2561645(+) (htrA) [Enterococcus faecalis strain W5]
ATGCAACGAAAAGATGTTACACCTAATTCAGATAAAAAAAGTTTATTGCAAAAATTTGGGATTGGTTTAGCTGGCGGCTT
ACTTGGTGGCGCTCTTATTCTAGGAGGCGCTTATTCTGGGATTATTCCCACACCCAACGGCGGAAATAATGCGGCGACGA
CGACGTCCACTAATCACGGCGACACAAAAGTCAGCAATGTGAGTTACAATGTTTCTAGCGATGTCACAAAAGCCGTGAAA
AAAGTTCAAAATTCTGTGGTTTCTGTCATTAATATGCAAAGTGCTAGCAACAATTCTTCGGCAGATGATCCTTTTGGGGG
ATTGTTCGGTGGGAATGAAGGTACTCAAGACTCTTCCGGCAACAATGATAACGATTTAGAAGCAGCCAGTGAAGGTAGTG
GGGTTATTTATAAGAAAGATGGTAAAACGGCTTATGTCGTGACAAATAACCACGTCGTAGATAAAGCGCAAGGATTGGAA
GTTGTTTTATCTGATGGTACCAAAGTGAAAGGCGAATTAGTCGGAACCGATGCTTACACGGATTTAGCCGTGATTAAAAT
TTCTTCTGACAAAGTTAATCAAGTCGCTGAGTTTGGGAATTCTAGTAAAATCACAGTCGGTGAGCCTGCTATTGCAATTG
GTTCCCCGCTAGGTTCTGATTATGCTAACTCTGTCACACAAGGAATCATCTCTTCTGTGAATAGAAATATTACCAATAAA
AATGAATCCGGTGAAACTATCAATATTAATGCCATTCAAACCGATGCTGCCATCAATCCAGGAAACTCTGGTGGTCCACT
AATCAATATTGAAGGACAAGTCATTGGAATTAACTCAGTAAAAATTGTGCAATCAACTAGTCAAGTGAGCGTTGAAGGGA
TGGGCTTTGCCATTCCAAGTAATGACGTAGTCAACATTATCAACCAATTAGAAAAAGATGGTAAAGTGACGCGGCCAGCT
CTCGGGATTACGATGTCTGATTTAACAGGTATCTCTTCACAACAACAAGAACAAATTTTAAAAATTCCAGCTTCTGTAAA
AACTGGCGTAGTGGTTCGTGGTGTTGAAGCAGCGACCCCTGCTGAAAAGGCTGGATTGGAAAAATACGATGTTATCACGA
AAGTTGACGGCCAAGACGTAAGCTCTACTACAGATTTACAAAGCGCGCTTTACAAGAAAAAAGTTGGCGACAAAATGGAA
GTGACTTATTATCGTGGTTCTAAAGAAATGAAAGCAACCATCGATTTAACCATTGATAAATCAGCTTTAACACAACAAAA
TAATCGCAGCAATCAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  htrA Streptococcus gordonii str. Challis substr. CH1

52.683

94.907

0.5

  htrA Streptococcus mutans UA159

58.516

84.259

0.493

  htrA Streptococcus mitis NCTC 12261

55.135

85.648

0.472

  htrA Streptococcus pneumoniae TIGR4

55.807

81.713

0.456

  htrA Streptococcus pneumoniae Rx1

55.807

81.713

0.456

  htrA Streptococcus pneumoniae D39

55.807

81.713

0.456

  htrA Streptococcus pneumoniae R6

55.807

81.713

0.456