Detailed information    

insolico Bioinformatically predicted

Overview


Name   stkP   Type   Regulator
Locus tag   PW220_RS02085 Genome accession   NZ_CP118734
Coordinates   398746..400734 (+) Length   662 a.a.
NCBI ID   WP_105117726.1    Uniprot ID   A0AA96VJ72
Organism   Streptococcus iners subsp. hyiners strain 29892     
Function   require for competence development; phosphorylate ComE (predicted from homology)   
Competence regulation

Genomic Context


Location: 393746..405734
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  PW220_RS02070 (PW220_02070) fmt 395732..396667 (+) 936 WP_248055905.1 methionyl-tRNA formyltransferase -
  PW220_RS02075 (PW220_02075) rsmB 396657..397970 (+) 1314 WP_248055904.1 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB -
  PW220_RS02080 (PW220_02080) - 398009..398746 (+) 738 WP_105117725.1 Stp1/IreP family PP2C-type Ser/Thr phosphatase -
  PW220_RS02085 (PW220_02085) stkP 398746..400734 (+) 1989 WP_105117726.1 Stk1 family PASTA domain-containing Ser/Thr kinase Regulator
  PW220_RS02090 (PW220_02090) liaF 400831..401526 (+) 696 WP_248055903.1 cell wall-active antibiotics response protein LiaF -
  PW220_RS02095 (PW220_02095) - 401523..402539 (+) 1017 WP_105124383.1 sensor histidine kinase -
  PW220_RS02100 (PW220_02100) - 402511..403152 (+) 642 WP_105124382.1 response regulator transcription factor -
  PW220_RS02105 (PW220_02105) - 403198..404598 (+) 1401 WP_248055902.1 bifunctional Cof-type HAD-IIB family hydrolase/peptidylprolyl isomerase -
  PW220_RS02110 (PW220_02110) - 404600..404971 (+) 372 WP_105117730.1 S1 RNA-binding domain-containing protein -

Sequence


Protein


Download         Length: 662 a.a.        Molecular weight: 71173.14 Da        Isoelectric Point: 6.7853

>NTDB_id=794678 PW220_RS02085 WP_105117726.1 398746..400734(+) (stkP) [Streptococcus iners subsp. hyiners strain 29892]
MIQIGKIFAGRYRIVRQIGRGGMADVYLARDLILDGEEVAVKVLRTNYQTDQIAIQRFQREARAMADLDHPNIVRISDIG
EEDGQQYLAMEYINGLDLKRYIKENAPLSNDVAVRIMGQILLAMRMAHTRGIVHRDLKPQNVILTSSGVAKVTDFGIAVA
FAETSLTQTNSMLGSVHYLSPEQARGSKATIQSDIYAMGIILFEMLTGRIPYDGDSAVTIALQHFQKPLPSVREENANVP
QALENVVLKATAKKLNDRYKSVAEMYTDLASALSFDRRNEGKVSLEGNKVDTKTLPKLSQANVEAKPLASTGAPKTNVEN
RPAGKAMTQKVAGKSAAKPRKGIRTRFKVLFGALLLTLMAVGLMFFNSPKTVIVPDVTGQTIEKAQEMIEVAGLEVGNVT
KEATNEVEEGLVIRTSPGAKTSKRQGSKVDLVIATVAMVVIPEVSGKDVETARKELETLGLQVTITEEYNTTVAKGMVIK
TSPEVNASAEKGSSITLYVSKGIVVPNVIGKTQEAASQILQDAGFYIGTVTQVYSSTVEAGQVISTDPIADTELEKGSVI
NIEVSKGKELIMPDLTSGHLTYSQASSQLQDLGVTVANIEKQEDRSYYSTTSDIVIGQYPAAGATIEGTVTLYVSVASGT
STANSTSSSSTSTTTSTSTSGQ

Nucleotide


Download         Length: 1989 bp        

>NTDB_id=794678 PW220_RS02085 WP_105117726.1 398746..400734(+) (stkP) [Streptococcus iners subsp. hyiners strain 29892]
ATGATTCAAATCGGTAAGATTTTTGCTGGACGCTATCGGATTGTCCGGCAAATTGGTCGAGGCGGTATGGCGGATGTTTA
TCTGGCTAGGGATTTGATATTGGATGGGGAAGAAGTGGCTGTTAAGGTCCTCCGCACCAACTATCAGACTGACCAGATTG
CCATCCAGCGTTTCCAACGGGAAGCGCGCGCTATGGCGGACCTGGATCACCCAAATATTGTTCGTATTTCGGACATTGGT
GAGGAAGATGGTCAACAGTATCTAGCCATGGAATACATCAACGGCCTTGACTTGAAACGCTATATCAAGGAGAATGCTCC
TCTTTCAAATGATGTGGCAGTTCGTATCATGGGACAAATTCTCCTAGCTATGCGAATGGCCCATACTCGTGGTATTGTCC
ATAGGGACTTGAAACCTCAGAATGTTATCTTGACATCTAGTGGTGTCGCTAAGGTAACGGACTTTGGTATTGCAGTTGCC
TTTGCGGAAACCAGTTTGACCCAAACCAACTCCATGCTGGGCTCTGTCCACTATCTTTCTCCGGAGCAGGCGCGTGGTTC
TAAAGCGACTATTCAAAGCGATATCTATGCAATGGGGATTATTCTCTTTGAGATGTTGACAGGACGGATTCCTTATGATG
GTGATAGTGCGGTGACCATTGCTCTCCAGCATTTCCAAAAACCACTGCCGTCTGTCAGAGAAGAAAACGCAAATGTCCCT
CAAGCACTTGAAAATGTAGTGTTGAAGGCGACTGCTAAAAAATTAAATGATCGCTATAAATCTGTAGCAGAAATGTACAC
AGATTTGGCTTCAGCTTTATCTTTCGATCGTAGAAATGAAGGAAAGGTATCATTAGAGGGCAATAAGGTTGATACAAAAA
CTTTACCAAAACTCTCTCAGGCAAATGTTGAAGCTAAGCCACTAGCCAGTACAGGAGCACCCAAAACAAATGTAGAAAAT
CGTCCAGCTGGAAAGGCTATGACACAAAAGGTGGCTGGAAAATCTGCAGCTAAACCGAGGAAAGGTATTAGGACTCGATT
TAAAGTCTTGTTTGGAGCCCTTCTTTTGACCCTTATGGCGGTCGGTCTTATGTTTTTCAATTCACCAAAAACAGTAATTG
TGCCTGATGTGACTGGTCAAACGATTGAAAAAGCACAGGAGATGATAGAAGTTGCTGGATTAGAAGTAGGGAATGTCACA
AAAGAGGCAACCAATGAAGTTGAAGAAGGCTTAGTGATTCGTACTTCGCCAGGAGCTAAGACTTCAAAACGTCAAGGAAG
TAAGGTAGATCTGGTAATTGCTACAGTTGCTATGGTTGTTATCCCAGAAGTGAGTGGTAAAGATGTTGAAACTGCTCGGA
AAGAACTAGAAACACTGGGACTCCAAGTGACGATTACAGAGGAGTACAATACTACGGTTGCAAAAGGGATGGTTATCAAG
ACCAGTCCAGAGGTAAATGCTTCTGCAGAAAAAGGTAGCAGCATCACTCTCTATGTTTCTAAAGGTATTGTTGTACCTAA
TGTTATTGGTAAAACCCAGGAAGCGGCTAGTCAAATTTTACAAGATGCAGGTTTCTATATAGGAACTGTTACTCAGGTTT
ATAGTTCAACTGTTGAAGCAGGTCAGGTGATTAGTACTGATCCAATTGCTGATACAGAGCTTGAGAAAGGCTCGGTTATC
AATATTGAAGTATCGAAAGGTAAGGAGCTTATTATGCCTGACTTGACTTCTGGTCATCTCACTTATTCTCAGGCAAGTAG
TCAGTTGCAAGATTTAGGAGTCACTGTTGCAAATATTGAAAAACAAGAGGATAGGAGCTATTATTCAACGACAAGCGATA
TTGTCATAGGCCAATATCCAGCAGCAGGTGCCACGATTGAGGGTACTGTAACCCTCTATGTATCAGTAGCATCGGGTACT
AGTACTGCAAATTCGACAAGCTCTTCTAGTACAAGTACTACCACTTCAACTTCTACTAGTGGACAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  stkP Streptococcus pneumoniae TIGR4

53.81

97.13

0.523

  stkP Streptococcus pneumoniae D39

53.655

97.13

0.521

  stkP Streptococcus pneumoniae R6

53.655

97.13

0.521

  stkP Streptococcus pneumoniae Rx1

53.499

97.13

0.52

  pknB Streptococcus mutans UA159

55.179

80.211

0.443

  stkP/pknB Streptococcus salivarius strain HSISS4

54.089

81.269

0.44