Detailed information    

insolico Bioinformatically predicted

Overview

Name   mecA   Type   Regulator
Locus tag   PXH68_RS07840 Genome accession   NZ_CP118733
Coordinates   1697339..1698052 (-) Length   237 a.a.
NCBI ID   WP_248028281.1    Uniprot ID   -
Organism   Streptococcus suivaginalis strain 29896     
Function   degradation of ComW (predicted from homology)   
Competence regulation

Genomic Context

Location: 1692339..1703052
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  PXH68_RS07815 (PXH68_07815) sufU 1692361..1692801 (-) 441 WP_248028277.1 Fe-S cluster assembly sulfur transfer protein SufU -
  PXH68_RS07820 (PXH68_07820) - 1692788..1694011 (-) 1224 WP_248028278.1 cysteine desulfurase -
  PXH68_RS07825 (PXH68_07825) sufD 1694015..1695277 (-) 1263 WP_248028279.1 Fe-S cluster assembly protein SufD -
  PXH68_RS07830 (PXH68_07830) sufC 1695294..1696067 (-) 774 WP_248028280.1 Fe-S cluster assembly ATPase SufC -
  PXH68_RS07835 (PXH68_07835) - 1696147..1697334 (-) 1188 WP_158457426.1 glycosyltransferase family 4 protein -
  PXH68_RS07840 (PXH68_07840) mecA 1697339..1698052 (-) 714 WP_248028281.1 adaptor protein MecA Regulator
  PXH68_RS07845 (PXH68_07845) - 1698183..1699046 (-) 864 WP_248028282.1 undecaprenyl-diphosphate phosphatase -
  PXH68_RS07850 (PXH68_07850) - 1699163..1700713 (+) 1551 WP_248028297.1 ABC transporter substrate-binding protein/permease -
  PXH68_RS07855 (PXH68_07855) - 1700706..1701449 (+) 744 WP_248028283.1 amino acid ABC transporter ATP-binding protein -
  PXH68_RS07860 (PXH68_07860) - 1701546..1701755 (-) 210 WP_158457303.1 hypothetical protein -

Sequence

Protein


Download         Length: 237 a.a.        Molecular weight: 27796.16 Da        Isoelectric Point: 4.1777

>NTDB_id=794648 PXH68_RS07840 WP_248028281.1 1697339..1698052(-) (mecA) [Streptococcus suivaginalis strain 29896]
MKVKQISDSTLKITILLDDLEERGMEIADFLIPQEKTEDFFYTVLDELDLPNHFKESGMLSFRVTPKPDRVDIFVTKSEI
DQQLDFEDLADLSNLDDVSKLSPEQLFKTFEDSLRSKSAADSAAVNFLEEVDNLDAEEEEEDRRYIYYILEFDDFQQLHQ
FSQTVDFDIEESELYKMDGRYYMTVLIHVEHKVRNYPEYVLARMLEHSRDSNLTRAVLQEHGYLLLPQAALATVRKV

Nucleotide


Download         Length: 714 bp        

>NTDB_id=794648 PXH68_RS07840 WP_248028281.1 1697339..1698052(-) (mecA) [Streptococcus suivaginalis strain 29896]
ATGAAAGTCAAGCAAATAAGTGATTCGACCTTAAAAATCACCATTTTATTAGACGATTTAGAAGAAAGAGGGATGGAGAT
TGCTGATTTTCTGATTCCTCAAGAAAAAACAGAAGACTTTTTCTACACTGTCTTGGATGAATTGGATCTGCCAAATCATT
TCAAGGAAAGTGGGATGCTTAGTTTTCGAGTAACGCCAAAACCTGATCGTGTGGATATTTTTGTCACCAAGTCAGAAATT
GACCAGCAGTTAGATTTTGAAGACCTGGCAGATTTGTCCAACTTGGATGATGTGTCCAAGCTTTCTCCAGAACAGTTATT
TAAGACTTTTGAAGATTCCTTGCGTAGTAAGAGTGCAGCGGACAGTGCAGCAGTGAATTTTTTGGAAGAAGTGGATAACT
TGGATGCTGAAGAAGAGGAAGAGGATCGTCGGTACATCTATTACATCCTTGAATTTGATGATTTCCAACAACTGCATCAA
TTCAGTCAAACAGTTGATTTTGACATCGAGGAGTCTGAACTCTACAAAATGGATGGTCGCTACTACATGACAGTTTTGAT
TCATGTGGAGCATAAGGTTAGAAACTACCCAGAGTATGTCTTGGCGCGAATGCTGGAACATAGTAGGGATTCCAACTTGA
CCCGTGCTGTCCTTCAAGAGCATGGGTATCTCTTGTTGCCTCAGGCGGCCTTGGCCACTGTGAGAAAGGTCTGA

Domains

Predicted by InterproScan.

Negative regulator of genetic competence (MecA) (MecA)

(1-233)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mecA Streptococcus pneumoniae Rx1

52.049

100

0.536
  mecA Streptococcus pneumoniae D39

52.049

100

0.536
  mecA Streptococcus pneumoniae R6

52.049

100

0.536
  mecA Streptococcus pneumoniae TIGR4

52.049

100

0.536
  mecA Streptococcus mutans UA159

52.049

100

0.536
  mecA Streptococcus thermophilus LMD-9

46.586

100

0.489
  mecA Streptococcus thermophilus LMG 18311

46.185

100

0.485