Detailed information    

insolico Bioinformatically predicted

Overview


Name   stkP   Type   Regulator
Locus tag   PXH68_RS02065 Genome accession   NZ_CP118733
Coordinates   436567..438573 (+) Length   668 a.a.
NCBI ID   WP_248027297.1    Uniprot ID   A0AA96VGC6
Organism   Streptococcus suivaginalis strain 29896     
Function   require for competence development; phosphorylate ComE (predicted from homology)   
Competence regulation

Genomic Context


Location: 431567..443573
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  PXH68_RS02050 (PXH68_02050) fmt 433558..434493 (+) 936 WP_205031338.1 methionyl-tRNA formyltransferase -
  PXH68_RS02055 (PXH68_02055) rsmB 434486..435793 (+) 1308 WP_398582966.1 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB -
  PXH68_RS02060 (PXH68_02060) - 435830..436567 (+) 738 WP_158455596.1 Stp1/IreP family PP2C-type Ser/Thr phosphatase -
  PXH68_RS02065 (PXH68_02065) stkP 436567..438573 (+) 2007 WP_248027297.1 Stk1 family PASTA domain-containing Ser/Thr kinase Regulator
  PXH68_RS02070 (PXH68_02070) liaF 438726..439421 (+) 696 WP_248027116.1 cell wall-active antibiotics response protein LiaF -
  PXH68_RS02075 (PXH68_02075) - 439421..440422 (+) 1002 WP_398582973.1 sensor histidine kinase -
  PXH68_RS02080 (PXH68_02080) - 440409..441050 (+) 642 WP_158455590.1 response regulator transcription factor -
  PXH68_RS02085 (PXH68_02085) - 441123..442523 (+) 1401 WP_248027112.1 bifunctional Cof-type HAD-IIB family hydrolase/peptidylprolyl isomerase -
  PXH68_RS02090 (PXH68_02090) - 442525..442890 (+) 366 WP_158455586.1 S1 RNA-binding domain-containing protein -

Sequence


Protein


Download         Length: 668 a.a.        Molecular weight: 71675.47 Da        Isoelectric Point: 6.3054

>NTDB_id=794619 PXH68_RS02065 WP_248027297.1 436567..438573(+) (stkP) [Streptococcus suivaginalis strain 29896]
MIQIGKIYAGRYRIVKQIGRGGMADVYMARDLILDGEEVAVKVLRTNYQTDQIAIQRFQREARSMAELDHPNIVRITDIG
EEDGQQYLAMEYVNGLDLKKYIKDFAPLSNDDAVRIMGQILLAMRMAHTRGIVHRDLKPQNVLLTEDGTAKVTDFGIAVA
FAETSLTQTNSMLGSVHYLSPEQARGSKATVQSDIYAMGIILFEMLTGRIPYDGDSAVTIALQHFQKPLPSVREENPAVP
QALENVVMKATAKKLSARYKSVAEMYADLASALSYERRNEAKVILDDNKVDTKTLPKLAQVNPEATTPSKKQAKQEAKKE
KVAAKNKPKPAPLPKAQKKRRGMRTRYKVLLGSIFLMLAGFVAILYNTPATVQVPDVTGQTLEVAKEKIETAGLLVGNVT
SEASTEIPEGSVIRTNPAAKSSKREGSTVDIVVAVEEAINIPDLVGKDAETAQAELENLGFEVVLKEDYSDTVSAGKVIK
TSPNANTSHQKGTTVTVTVSKGVEPVEVPDVTGKSLSEATQMLKSAGLIVGTTTEEFSVQVESGYVISSDPVATTTLEKG
TAVNLVVSKGQAAVMPDFGVLQVSYAEARRQLQALGVDVTTIEKFVDNAYTSTTGDLVVGQSPGAGESITGTVTLYVTVA
SSSSSSTSSTGTTTTTSSSSSTSTSSSQ

Nucleotide


Download         Length: 2007 bp        

>NTDB_id=794619 PXH68_RS02065 WP_248027297.1 436567..438573(+) (stkP) [Streptococcus suivaginalis strain 29896]
ATGATTCAAATTGGTAAAATCTATGCTGGGCGGTATCGTATTGTCAAGCAGATTGGCCGAGGAGGAATGGCAGATGTCTA
TATGGCACGAGATTTGATCTTGGATGGGGAAGAAGTTGCTGTAAAGGTTCTTCGTACCAACTACCAGACAGATCAGATTG
CTATCCAACGTTTCCAGCGGGAAGCACGTTCTATGGCTGAACTGGATCATCCCAATATTGTCCGTATTACTGACATTGGT
GAAGAAGATGGGCAACAATACCTAGCAATGGAATATGTCAATGGACTGGATTTGAAAAAGTACATCAAGGATTTTGCTCC
TTTGTCTAATGATGATGCGGTTCGAATTATGGGCCAGATTCTACTTGCTATGCGTATGGCACATACCCGGGGTATTGTCC
ATCGTGACTTGAAGCCCCAAAACGTCTTGTTGACCGAAGACGGAACCGCTAAGGTAACGGATTTTGGGATTGCAGTTGCC
TTCGCGGAAACCAGCTTGACCCAGACCAACTCCATGTTGGGCTCAGTTCACTACCTTTCTCCTGAACAGGCTAGAGGTTC
GAAAGCAACCGTTCAAAGTGACATCTATGCCATGGGAATTATCCTCTTTGAGATGTTGACTGGTCGGATTCCTTATGATG
GAGATAGTGCGGTTACGATTGCCCTCCAGCATTTCCAAAAGCCGCTGCCATCTGTTCGGGAAGAAAATCCAGCTGTACCA
CAGGCTTTGGAAAATGTTGTGATGAAGGCAACAGCGAAAAAACTATCCGCTCGTTATAAGTCTGTGGCAGAGATGTATGC
AGACTTGGCTTCAGCCCTTTCTTATGAACGCCGAAATGAAGCCAAAGTGATTTTGGATGATAATAAGGTTGATACAAAAA
CCCTACCAAAACTGGCTCAAGTCAATCCAGAAGCAACAACGCCGAGTAAAAAACAGGCTAAACAAGAAGCTAAGAAAGAA
AAAGTTGCAGCCAAAAACAAGCCAAAACCTGCTCCGCTTCCAAAAGCGCAGAAAAAACGTCGTGGTATGCGTACCCGTTA
CAAGGTCTTACTTGGTTCCATCTTTTTGATGCTAGCAGGATTTGTTGCCATCCTCTACAACACACCGGCAACAGTCCAAG
TCCCAGACGTTACAGGTCAGACCTTGGAAGTTGCGAAAGAAAAAATTGAAACTGCAGGTCTCTTGGTTGGAAATGTAACC
AGTGAGGCGTCGACGGAAATTCCAGAAGGCTCAGTGATTCGTACCAATCCGGCGGCAAAAAGCTCCAAGCGAGAAGGGTC
GACAGTTGATATTGTTGTGGCGGTTGAAGAGGCGATCAATATTCCGGATTTGGTTGGAAAAGATGCAGAGACTGCCCAGG
CCGAACTAGAGAACCTAGGTTTTGAAGTTGTCCTGAAAGAAGATTACAGTGATACTGTTTCGGCAGGTAAGGTTATCAAA
ACCAGCCCAAATGCCAATACCTCTCATCAAAAAGGAACCACAGTAACTGTGACTGTTTCTAAAGGGGTAGAACCAGTCGA
AGTTCCAGATGTAACAGGAAAATCGCTATCAGAAGCGACACAAATGCTCAAATCCGCAGGTTTGATTGTCGGAACGACGA
CAGAAGAATTTAGTGTTCAAGTGGAGTCAGGCTATGTGATCAGCTCGGATCCAGTTGCAACAACCACCCTAGAAAAAGGC
ACGGCCGTTAACTTGGTTGTGTCGAAAGGTCAAGCAGCGGTGATGCCAGACTTTGGGGTTTTACAAGTTAGCTATGCAGA
GGCCAGAAGGCAACTACAAGCCCTGGGAGTTGATGTTACAACTATTGAAAAATTTGTTGACAATGCCTATACTTCTACGA
CAGGAGATTTGGTTGTCGGACAATCTCCGGGAGCAGGAGAGTCCATCACAGGGACTGTAACGCTCTATGTCACAGTTGCT
TCGTCAAGTAGTTCATCAACAAGCTCTACTGGAACAACAACTACCACAAGTAGTTCGAGTTCGACATCTACTTCAAGTAG
CCAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  stkP Streptococcus pneumoniae TIGR4

56.26

96.856

0.545

  stkP Streptococcus pneumoniae D39

55.951

96.856

0.542

  stkP Streptococcus pneumoniae R6

55.951

96.856

0.542

  stkP Streptococcus pneumoniae Rx1

55.796

96.856

0.54

  pknB Streptococcus mutans UA159

57.895

79.641

0.461

  stkP/pknB Streptococcus salivarius strain HSISS4

56.458

81.138

0.458