Detailed information NTG0079273

Bioinformatically predicted

Overview

• Name: comA
• Type: Regulator
• Locus tag: QMM33_RS04490
• Genome accession: NZ_AP025940
• Coordinates: 875526..876167 (+)
• Length: 213 a.a.
• NCBI ID: WP_078140886.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae strain PZ900700204
• Function: processing and transport of ComC (predicted from homology) Competence regulation

Genomic Context

Location: 870526..881167

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QMM33_RS04460 (PC0204_08710)	-	870740..872149 (+)	1410	WP_000773464.1	hypothetical protein	-
QMM33_RS04465 (PC0204_08720)	-	872154..872642 (+)	489	WP_000872894.1	phosphatidylglycerophosphatase A	-
QMM33_RS04470 (PC0204_08730)	-	872930..873337 (+)	408	WP_000216067.1	cytidine deaminase	-
QMM33_RS04475 (PC0204_08740)	-	873369..874286 (+)	918	Protein_890	dihydrodipicolinate synthase family protein	-
QMM33_RS04480 (PC0204_08750)	-	874313..874507 (+)	195	Protein_891	ROK family protein	-
QMM33_RS04485 (PC0204_08760)	-	874657..875253 (-)	597	WP_000547414.1	transposase	-
QMM33_RS10580	-	875214..875401 (+)	188	Protein_893	hypothetical protein	-
QMM33_RS04490 (PC0204_08770)	comA	875526..876167 (+)	642	WP_078140886.1	ATP-binding cassette domain-containing protein	Regulator
QMM33_RS04495 (PC0204_08780)	-	876180..876350 (+)	171	WP_000711943.1	hypothetical protein	-
QMM33_RS04500 (PC0204_08790)	gdhA	876846..878192 (-)	1347	WP_050207106.1	NADP-specific glutamate dehydrogenase	-
QMM33_RS04505	-	878533..879166 (+)	634	Protein_897	winged helix-turn-helix domain-containing protein	-
QMM33_RS04510	-	879169..880180 (+)	1012	Protein_898	Dyp-type peroxidase	-
QMM33_RS04515 (PC0204_08830)	-	880155..880733 (+)	579	WP_000252103.1	hypothetical protein	-
QMM33_RS04520 (PC0204_08840)	-	880790..881032 (-)	243	WP_000710764.1	type B 50S ribosomal protein L31	-

Sequence

Protein

• Length: 213 a.a.
• Molecular weight: 23605.43 Da
• Isoelectric Point: 9.6786

>NTDB_id=79273 QMM33_RS04490 WP_078140886.1 875526..876167(+) (comA) [Streptococcus pneumoniae strain PZ900700204]
MTIESGQRIALVGQPGSGKSTLSKIPSRLYKIDTGKVLFDGININQIDKKILSQNLGVVPQDSFLLNRSILDNITLKHEV
TSQKIEEVCKAVQIYDEIMAMPMKFNTIISEMGSNISGGQRQRIALARALINNPSIVILDEATSALDTINEGRITKYIQS
QSCTQIIIAHRLSTIKDADIIFVMKGGKIVESGNHKYLMTLGGEYYSLYTKRK

Nucleotide

• Length: 642 bp

>NTDB_id=79273 QMM33_RS04490 WP_078140886.1 875526..876167(+) (comA) [Streptococcus pneumoniae strain PZ900700204]
TTGACTATTGAGTCAGGACAGAGAATTGCACTAGTCGGTCAACCGGGGTCAGGAAAAAGTACATTATCAAAAATACCATC
AAGATTATATAAGATTGATACAGGAAAAGTTTTATTTGATGGTATAAATATTAATCAAATAGATAAAAAAATATTAAGTC
AAAATTTAGGAGTAGTTCCACAGGATTCATTTTTATTGAACCGAAGTATTCTTGATAATATAACTTTAAAGCACGAAGTT
ACTTCACAAAAGATAGAGGAAGTTTGTAAAGCAGTTCAAATCTATGATGAAATCATGGCTATGCCGATGAAATTTAATAC
TATCATCTCAGAGATGGGGTCAAATATTTCAGGTGGGCAAAGGCAACGGATAGCACTGGCACGTGCATTAATAAATAATC
CTAGTATTGTAATTTTAGATGAAGCAACTAGTGCATTAGACACTATTAATGAGGGAAGAATAACAAAGTATATACAAAGT
CAGAGTTGTACTCAAATAATTATAGCTCATAGATTGTCAACGATTAAGGATGCGGATATTATTTTTGTAATGAAAGGTGG
TAAGATTGTTGAGTCAGGAAATCATAAGTACTTAATGACTCTTGGTGGAGAGTACTACAGCTTATATACAAAAAGGAAAT
GA

Domains

Predicted by InterProScan.

• ABC transporter (ABC_tran) (1-144)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comA	Streptococcus mitis NCTC 12261	42.857	98.592	0.423
comA	Streptococcus mitis SK321	42.381	98.592	0.418
comA/nlmT	Streptococcus mutans UA159	41.981	99.531	0.418
comA	Streptococcus pneumoniae R6	41.429	98.592	0.408
comA	Streptococcus pneumoniae Rx1	41.429	98.592	0.408
comA	Streptococcus pneumoniae D39	41.429	98.592	0.408
comA	Streptococcus gordonii str. Challis substr. CH1	41.038	99.531	0.408
comA	Streptococcus pneumoniae TIGR4	40.476	98.592	0.399
rcrQ	Streptococcus mutans UA159	36.15	100	0.362