Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | KATP_RS21335 | Genome accession | NZ_AP022665 |
| Coordinates | 4512653..4513180 (-) | Length | 175 a.a. |
| NCBI ID | WP_035896752.1 | Uniprot ID | A0A378GVM1 |
| Organism | Kluyvera ascorbata strain TP1631 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 4507653..4518180
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| KATP_RS21315 (KATP_42090) | - | 4507725..4508468 (-) | 744 | WP_035895938.1 | IclR family transcriptional regulator | - |
| KATP_RS21320 (KATP_42100) | - | 4508736..4509440 (-) | 705 | WP_035895936.1 | GntR family transcriptional regulator | - |
| KATP_RS21325 (KATP_42110) | oxlT | 4509455..4510771 (-) | 1317 | WP_373240733.1 | oxalate/formate MFS antiporter | - |
| KATP_RS21330 (KATP_42120) | - | 4510806..4512413 (-) | 1608 | WP_258557159.1 | gamma-glutamyltransferase family protein | - |
| KATP_RS21335 (KATP_42130) | ssb | 4512653..4513180 (-) | 528 | WP_035896752.1 | single-stranded DNA-binding protein SSB1 | Machinery gene |
| KATP_RS21340 (KATP_42140) | uvrA | 4513435..4516260 (+) | 2826 | WP_035896754.1 | excinuclease ABC subunit UvrA | - |
| KATP_RS21345 (KATP_42150) | - | 4516261..4516614 (-) | 354 | WP_035896770.1 | MmcQ/YjbR family DNA-binding protein | - |
| KATP_RS21350 (KATP_42160) | aphA | 4516839..4517552 (-) | 714 | WP_035896755.1 | acid phosphatase AphA | - |
Sequence
Protein
Download Length: 175 a.a. Molecular weight: 18748.76 Da Isoelectric Point: 5.2456
>NTDB_id=79117 KATP_RS21335 WP_035896752.1 4512653..4513180(-) (ssb) [Kluyvera ascorbata strain TP1631]
MASRGVNKVILVGNLGQDPEVRYMPNGGAVANITLATSESWRDKATGEMKEQTEWHRVVLFGKLAEVAGEYLRKGSQVYI
EGQLRTRKWTDQSGAEKYTTEVVVNVGGTMQMLGGRQGGGAPAGGGQQQQGGWGQPQQPQGGNQFSGGAQSRPQQQSAPA
PSNEPPMDFDDDIPF
MASRGVNKVILVGNLGQDPEVRYMPNGGAVANITLATSESWRDKATGEMKEQTEWHRVVLFGKLAEVAGEYLRKGSQVYI
EGQLRTRKWTDQSGAEKYTTEVVVNVGGTMQMLGGRQGGGAPAGGGQQQQGGWGQPQQPQGGNQFSGGAQSRPQQQSAPA
PSNEPPMDFDDDIPF
Nucleotide
Download Length: 528 bp
>NTDB_id=79117 KATP_RS21335 WP_035896752.1 4512653..4513180(-) (ssb) [Kluyvera ascorbata strain TP1631]
ATGGCCAGCAGAGGCGTAAACAAGGTGATTCTCGTCGGTAACCTGGGCCAGGACCCGGAAGTACGCTACATGCCGAATGG
TGGCGCAGTTGCCAACATTACGCTGGCTACTTCCGAATCCTGGCGTGACAAAGCGACCGGTGAAATGAAAGAGCAGACTG
AATGGCACCGCGTTGTGCTGTTCGGCAAGCTGGCGGAAGTAGCAGGCGAATACCTGCGTAAAGGCTCTCAGGTTTATATC
GAAGGCCAGCTGCGTACCCGCAAATGGACCGATCAGTCCGGCGCTGAAAAATACACCACCGAAGTCGTGGTTAACGTTGG
TGGCACCATGCAGATGCTGGGTGGCCGTCAGGGCGGCGGTGCACCGGCAGGTGGCGGCCAGCAGCAGCAGGGCGGTTGGG
GTCAGCCTCAGCAGCCACAGGGCGGCAATCAGTTCAGCGGCGGCGCGCAGTCTCGCCCGCAGCAGCAGTCCGCTCCGGCA
CCGTCTAACGAACCGCCGATGGACTTCGATGACGATATCCCGTTCTGA
ATGGCCAGCAGAGGCGTAAACAAGGTGATTCTCGTCGGTAACCTGGGCCAGGACCCGGAAGTACGCTACATGCCGAATGG
TGGCGCAGTTGCCAACATTACGCTGGCTACTTCCGAATCCTGGCGTGACAAAGCGACCGGTGAAATGAAAGAGCAGACTG
AATGGCACCGCGTTGTGCTGTTCGGCAAGCTGGCGGAAGTAGCAGGCGAATACCTGCGTAAAGGCTCTCAGGTTTATATC
GAAGGCCAGCTGCGTACCCGCAAATGGACCGATCAGTCCGGCGCTGAAAAATACACCACCGAAGTCGTGGTTAACGTTGG
TGGCACCATGCAGATGCTGGGTGGCCGTCAGGGCGGCGGTGCACCGGCAGGTGGCGGCCAGCAGCAGCAGGGCGGTTGGG
GTCAGCCTCAGCAGCCACAGGGCGGCAATCAGTTCAGCGGCGGCGCGCAGTCTCGCCCGCAGCAGCAGTCCGCTCCGGCA
CCGTCTAACGAACCGCCGATGGACTTCGATGACGATATCCCGTTCTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Vibrio cholerae strain A1552 |
75.556 |
100 |
0.777 |
| ssb | Glaesserella parasuis strain SC1401 |
57.065 |
100 |
0.6 |
| ssb | Neisseria meningitidis MC58 |
47.191 |
100 |
0.48 |
| ssb | Neisseria gonorrhoeae MS11 |
47.191 |
100 |
0.48 |
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
36.111 |
100 |
0.371 |