Detailed information NTG0787762

Bioinformatically predicted

Overview

• Name: comM
• Type: Machinery gene
• Locus tag: PT012_RS02505
• Genome accession: NZ_CP117820
• Coordinates: 568581..570101 (+)
• Length: 506 a.a.
• NCBI ID: WP_004086548.1
• Uniprot ID: A0AAW6HUC5
• Organism: Xylella fastidiosa subsp. multiplex strain ICMP 8740
• Function: ssDNA binding (predicted from homology) DNA processing

Genomic Context

Location: 563581..575101

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
PT012_RS02475 (PT012_02475)	rpsM	564296..564652 (+)	357	WP_004086542.1	30S ribosomal protein S13	-
PT012_RS02480 (PT012_02480)	rpsK	564668..565060 (+)	393	WP_004086543.1	30S ribosomal protein S11	-
PT012_RS02485 (PT012_02485)	rpsD	565075..565701 (+)	627	WP_004086544.1	30S ribosomal protein S4	-
PT012_RS02490 (PT012_02490)	rpoA	565757..566755 (+)	999	WP_004086545.1	DNA-directed RNA polymerase subunit alpha	-
PT012_RS02495 (PT012_02495)	rplQ	566885..567265 (+)	381	WP_004086546.1	50S ribosomal protein L17	-
PT012_RS02500 (PT012_02500)	-	568310..568570 (+)	261	WP_004086547.1	accessory factor UbiK family protein	-
PT012_RS02505 (PT012_02505)	comM	568581..570101 (+)	1521	WP_004086548.1	YifB family Mg chelatase-like AAA ATPase	Machinery gene
PT012_RS02510 (PT012_02510)	-	572806..573042 (+)	237	WP_202979880.1	hypothetical protein	-
PT012_RS02515 (PT012_02515)	-	573315..574363 (+)	1049	Protein_479	lipase secretion chaperone	-

Sequence

Protein

• Length: 506 a.a.
• Molecular weight: 54510.60 Da
• Isoelectric Point: 8.0750

>NTDB_id=787762 PT012_RS02505 WP_004086548.1 568581..570101(+) (comM) [Xylella fastidiosa subsp. multiplex strain ICMP 8740]
MSLALVHSRARAGVFAPSVRVEVHLSGGLPATQIVGLPEAAVRESRDRVRAALLCACFEYPARRITINLAPADLPKEGGR
FDLPIALGILAASGQLPLDALAGKEFLGELALTGELRSVDSVLPAALAASQAGHWLVIPESNGAEAAIAGCCEAYTARTL
LEVCAGLCGKTLLPAAQRFEVKADVLHDIPDISDVRGQEEARRVLEIAAAGGHHLLLIGSPGCGKTLLASRLPGLLPPAS
EQEALESASIASVSGHDLNLTHWRRRPYRAPHHSASAVALIGGGVQARPGEISLAHNGVLFMDELPEWQRKTLEALREPM
ESGVVTIARATRSVDYPARFQLVAAMNPCPCGWAGDSSGRCQCGVDAIRRYRRRISGPLLDRIDLQLEIPRLAPQLLRPS
TPRGEHSVTVRRRVTDSRTLQYNRQAGLNAHLGQAATERHCCLDVTDQQLLERAIEQLQLSARSMQRILRVARTIADLDG
STLITSMHLHEAIGYRRFDRTAFGIA

Nucleotide

• Length: 1521 bp

>NTDB_id=787762 PT012_RS02505 WP_004086548.1 568581..570101(+) (comM) [Xylella fastidiosa subsp. multiplex strain ICMP 8740]
ATGAGCTTGGCTTTGGTGCATAGCCGTGCCCGTGCTGGAGTTTTTGCACCCTCAGTTAGGGTTGAAGTACATTTGTCGGG
TGGCCTGCCTGCAACACAGATCGTTGGTTTGCCTGAGGCTGCTGTACGTGAATCTCGAGATCGAGTGCGTGCCGCGTTAT
TGTGTGCTTGCTTTGAATATCCGGCCCGACGTATCACCATTAATTTGGCGCCTGCTGACTTACCGAAGGAGGGCGGGCGC
TTTGATTTGCCGATTGCATTAGGAATCTTGGCCGCCAGCGGTCAATTGCCACTCGATGCTTTAGCAGGTAAGGAGTTCCT
AGGTGAACTTGCACTCACTGGAGAACTGCGTTCGGTTGACAGTGTGCTACCTGCGGCTTTAGCTGCATCACAGGCAGGAC
ACTGGCTGGTGATACCAGAAAGTAATGGTGCTGAAGCAGCAATCGCAGGGTGTTGTGAAGCTTATACTGCTCGCACTCTA
CTTGAGGTTTGTGCTGGCTTGTGCGGTAAAACATTATTGCCGGCTGCTCAGAGATTCGAAGTTAAGGCCGATGTATTGCA
TGATATTCCTGATATTTCTGACGTGCGCGGCCAAGAGGAAGCACGCCGTGTTCTTGAAATTGCTGCGGCTGGTGGACATC
ATTTGTTGCTGATTGGTAGTCCTGGTTGTGGTAAAACTCTTTTAGCCTCAAGATTGCCAGGCTTATTACCGCCAGCAAGC
GAGCAAGAAGCATTGGAGAGTGCGTCGATTGCCTCGGTGAGTGGGCATGATTTGAATCTGACTCATTGGCGACGACGTCC
CTATCGTGCTCCGCATCATAGTGCTAGCGCAGTTGCACTGATCGGTGGTGGGGTACAGGCACGTCCTGGTGAGATCTCGC
TCGCGCATAATGGCGTGCTATTTATGGATGAATTGCCCGAATGGCAACGCAAAACCTTGGAAGCCTTACGTGAACCCATG
GAATCAGGTGTAGTGACGATTGCTCGTGCCACACGTAGTGTGGATTATCCTGCCCGTTTTCAGTTAGTGGCTGCTATGAA
TCCTTGCCCTTGTGGTTGGGCAGGTGATTCGAGTGGACGTTGTCAATGTGGTGTGGATGCAATTCGACGTTATCGTCGCC
GTATTTCTGGTCCGTTATTGGACCGCATTGATCTACAGTTGGAAATACCACGGTTGGCACCGCAGCTACTGCGTCCTAGT
ACACCGCGTGGTGAACATAGTGTTACAGTGCGGAGGCGTGTCACTGATTCCAGGACTTTGCAATATAATCGACAAGCGGG
GCTTAATGCGCATCTGGGCCAAGCCGCAACCGAGCGTCATTGCTGTTTGGATGTGACCGACCAGCAGTTGCTGGAACGCG
CGATCGAACAGTTGCAGCTATCGGCACGTTCAATGCAACGGATTCTACGAGTAGCACGCACGATTGCTGATTTGGATGGT
AGCACATTAATCACCAGCATGCATTTGCATGAAGCGATCGGGTATCGTCGATTTGACCGTACAGCCTTTGGCATTGCTTA
A

Domains

Predicted by InterproScan.

• Magnesium chelatase, subunit ChlI C-terminal (Mg_chelatase_C) (404-496)

• Subunit ChlI of Mg-chelatase (ChlI) (21-142)

• Magnesium chelatase, subunit ChlI (Mg_chelatase) (191-393)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comM	Vibrio cholerae strain A1552	53.8	98.814	0.532
comM	Vibrio campbellii strain DS40M4	53.6	98.814	0.53
comM	Haemophilus influenzae Rd KW20	52.381	99.605	0.522
comM	Glaesserella parasuis strain SC1401	52.079	99.802	0.52
comM	Legionella pneumophila str. Paris	50	98.814	0.494
comM	Legionella pneumophila strain ERS1305867	50	98.814	0.494
RA0C_RS07335	Riemerella anatipestifer ATCC 11845 = DSM 15868	43.301	100	0.441