Detailed information    

insolico Bioinformatically predicted

Overview


Name   stkP   Type   Regulator
Locus tag   PL321_RS17205 Genome accession   NZ_CP117677
Coordinates   2439829..2440485 (-) Length   218 a.a.
NCBI ID   WP_273962779.1    Uniprot ID   -
Organism   Caloramator sp. mosi_1     
Function   phosphorylate ComE (predicted from homology)   
Competence regulation

Genomic Context


Location: 2434829..2445485
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  PL321_RS17175 (PL321_17190) - 2435395..2435743 (-) 349 Protein_3422 Asp23/Gls24 family envelope stress response protein -
  PL321_RS17180 (PL321_17195) rpmB 2435974..2436165 (+) 192 WP_027307423.1 50S ribosomal protein L28 -
  PL321_RS17185 (PL321_17200) rpe 2437222..2437931 (-) 710 Protein_3424 ribulose-phosphate 3-epimerase -
  PL321_RS17190 (PL321_17205) rsgA 2437934..2438808 (-) 875 Protein_3425 ribosome small subunit-dependent GTPase A -
  PL321_RS17195 (PL321_17210) - 2438821..2439543 (-) 723 WP_273962777.1 PASTA domain-containing protein -
  PL321_RS17200 (PL321_17215) - 2439504..2439728 (-) 225 WP_273962778.1 hypothetical protein -
  PL321_RS17205 (PL321_17220) stkP 2439829..2440485 (-) 657 WP_273962779.1 protein kinase Regulator
  PL321_RS17210 (PL321_17225) - 2440583..2441071 (-) 489 WP_337961213.1 protein phosphatase 2C domain-containing protein -
  PL321_RS17215 (PL321_17230) - 2441041..2441202 (-) 162 WP_273962780.1 hypothetical protein -
  PL321_RS17220 (PL321_17235) rlmN 2441215..2442237 (-) 1023 Protein_3431 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN -
  PL321_RS17225 (PL321_17240) - 2442242..2442547 (-) 306 WP_337961214.1 hypothetical protein -
  PL321_RS17230 (PL321_17245) rsmB 2442544..2443302 (-) 759 WP_273962781.1 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB -
  PL321_RS17235 (PL321_17250) - 2443272..2443568 (-) 297 WP_273962782.1 transcription antitermination factor NusB -
  PL321_RS17240 (PL321_17255) - 2443626..2444309 (-) 684 WP_273962783.1 zinc metallopeptidase -
  PL321_RS17245 (PL321_17260) fmt 2444320..2445247 (-) 928 Protein_3436 methionyl-tRNA formyltransferase -

Sequence


Protein


Download         Length: 218 a.a.        Molecular weight: 24398.30 Da        Isoelectric Point: 9.2914

>NTDB_id=786904 PL321_RS17205 WP_273962779.1 2439829..2440485(-) (stkP) [Caloramator sp. mosi_1]
MNLIGTTLGGRYIIVEQIGEGGMAVVYKAKDQLLNRYVAVKVLKQEFTQDEDFVKKFKRESIAAASLTHPNIVSIFDVGE
QDNIYYIVMEYIKGQTLKEYIKSNGKIGYKRVLDIILQIAMALENAHKNGVVHRDIKPHNIVVTEEGTIKVTDFGIARAS
TVATVTNTNKVLGSVHYLSPEQAKGGFSDHRTDIYSLGVVMYEMLTGRLPLMQKVQFL

Nucleotide


Download         Length: 657 bp        

>NTDB_id=786904 PL321_RS17205 WP_273962779.1 2439829..2440485(-) (stkP) [Caloramator sp. mosi_1]
ATGAATCTAATAGGTACAACCTTAGGTGGACGTTATATAATTGTAGAACAAATTGGAGAAGGTGGAATGGCTGTTGTATA
TAAAGCAAAGGACCAACTTCTTAATAGATATGTTGCAGTTAAGGTTTTAAAACAGGAATTTACTCAGGATGAAGATTTTG
TTAAGAAATTTAAAAGAGAATCCATAGCTGCAGCAAGCTTAACGCACCCTAACATTGTATCAATCTTTGATGTAGGAGAA
CAGGATAACATCTACTATATTGTAATGGAATATATTAAAGGTCAAACTCTTAAGGAATATATAAAAAGTAATGGCAAGAT
TGGATATAAAAGGGTATTAGATATAATCCTCCAGATAGCTATGGCGTTAGAAAATGCCCACAAAAATGGAGTTGTGCATA
GGGATATAAAACCCCACAACATAGTTGTAACAGAAGAAGGAACAATTAAAGTAACAGATTTTGGAATAGCAAGGGCTTCA
ACTGTTGCTACAGTTACTAACACAAATAAAGTATTAGGCTCAGTACATTATCTATCTCCAGAACAGGCAAAGGGTGGCTT
TAGTGACCATAGAACGGATATTTATTCACTCGGTGTTGTTATGTATGAGATGCTAACAGGAAGACTCCCTTTGATGCAGA
AAGTCCAATTTCTGTAG

Domains


Predicted by InterproScan.

(13-213)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  stkP Streptococcus pneumoniae D39

51.442

95.413

0.491

  stkP Streptococcus pneumoniae R6

51.442

95.413

0.491

  stkP Streptococcus pneumoniae TIGR4

51.442

95.413

0.491

  stkP Streptococcus pneumoniae Rx1

50.962

95.413

0.486

  stkP/pknB Streptococcus salivarius strain HSISS4

47.596

95.413

0.454

  pknB Streptococcus mutans UA159

47.596

95.413

0.454