Detailed information NTG0782448

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: PQ615_RS05830
• Genome accession: NZ_CP117058
• Coordinates: 1216189..1217034 (-)
• Length: 281 a.a.
• NCBI ID: WP_003099573.1
• Uniprot ID: A0A1J0MYY1
• Organism: Streptococcus iniae strain LSSM211007SI
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 1211189..1222034

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
PQ615_RS05815 (PQ615_05815)	-	1211746..1212804 (-)	1059	WP_003099589.1	PTS transporter subunit IIC	-
PQ615_RS05820 (PQ615_05820)	-	1212970..1213854 (+)	885	WP_003099578.1	LysR family transcriptional regulator	-
PQ615_RS05825 (PQ615_05825)	topA	1213948..1216092 (-)	2145	WP_304482077.1	type I DNA topoisomerase	-
PQ615_RS05830 (PQ615_05830)	dprA	1216189..1217034 (-)	846	WP_003099573.1	DNA-processing protein DprA	Machinery gene
PQ615_RS05835 (PQ615_05835)	-	1217100..1217648 (-)	549	WP_003099570.1	sugar O-acetyltransferase	-
PQ615_RS05840 (PQ615_05840)	-	1217661..1218446 (-)	786	WP_003099568.1	ribonuclease HII	-
PQ615_RS05845 (PQ615_05845)	ylqF	1218430..1219284 (-)	855	WP_003099566.1	ribosome biogenesis GTPase YlqF	-
PQ615_RS05850 (PQ615_05850)	-	1219754..1220593 (-)	840	WP_003099563.1	alpha/beta hydrolase	-
PQ615_RS05855 (PQ615_05855)	-	1220590..1221912 (-)	1323	WP_225111305.1	PTS sugar transporter subunit IIC	-

Sequence

Protein

• Length: 281 a.a.
• Molecular weight: 31550.74 Da
• Isoelectric Point: 9.9826

>NTDB_id=782448 PQ615_RS05830 WP_003099573.1 1216189..1217034(-) (dprA) [Streptococcus iniae strain LSSM211007SI]
MNNFELYKLKKAGLKNHHILNIIHYSQQTKKSLSLRNMAVVSGTSKPCLFLENYKLLNIKELRVEFKKYPSFSILDKTYP
LALKEIDNPPVLLFYQGNLELLNRHKLAVVGSRKSSAVGNKSVESLIKQLNNQFVIVSGLARGIDTVAHFSSIKQGGETI
AVIGSGLDIYYPKENRRLQEFIAEKHLLLSEYCPKEAPLAHHFPERNRIIAGLSMGVLVAEAKWRSGSLITCRFALDYGR
DIFVVPGAILDKQSQGGNHLIQEGAKLVTKGLDIISEYQFL

Nucleotide

• Length: 846 bp

>NTDB_id=782448 PQ615_RS05830 WP_003099573.1 1216189..1217034(-) (dprA) [Streptococcus iniae strain LSSM211007SI]
ATGAATAACTTTGAACTGTATAAATTAAAGAAAGCTGGCCTAAAAAATCATCATATTCTAAATATCATTCATTATAGCCA
GCAAACTAAGAAATCTCTATCACTTAGAAATATGGCTGTTGTTTCAGGAACAAGTAAACCATGTCTGTTTTTAGAAAATT
ACAAGCTGTTAAATATAAAAGAGTTACGAGTAGAATTTAAGAAGTATCCCAGCTTTTCAATTTTAGACAAGACCTATCCC
CTTGCTTTAAAAGAAATTGATAATCCGCCAGTATTATTATTTTATCAAGGAAATTTAGAGCTTTTAAATCGGCATAAATT
AGCAGTGGTAGGGTCAAGGAAATCCTCAGCAGTTGGAAACAAATCTGTTGAATCTCTCATCAAGCAACTTAATAATCAGT
TTGTTATTGTTAGTGGGTTGGCTAGAGGAATTGATACTGTAGCTCATTTTTCGAGCATCAAACAAGGTGGAGAGACTATT
GCTGTTATTGGATCAGGGTTAGACATTTATTATCCTAAGGAAAATAGAAGATTACAGGAGTTTATTGCTGAAAAGCATTT
ATTATTAAGTGAATATTGCCCTAAGGAAGCACCTTTAGCACATCATTTTCCAGAACGAAATCGCATAATTGCAGGCTTAT
CTATGGGAGTTTTAGTGGCAGAAGCCAAATGGCGTTCTGGTAGTCTAATCACTTGTCGCTTTGCACTTGATTACGGTAGG
GATATTTTTGTTGTTCCAGGCGCCATCCTTGACAAACAGTCGCAGGGAGGGAATCACCTCATTCAAGAGGGAGCGAAGCT
TGTTACAAAAGGACTTGACATCATTTCTGAATACCAATTTTTATAA

Domains

Predicted by InterproScan.

• DNA processing protein A sterile alpha motif domain (SAM_DprA) (1-62)

• DNA recombination-mediator protein A (DNA_processg_A) (73-269)

3D structure

• AlphaFold DB: A0A1J0MYY1

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Streptococcus mutans UA159	66.786	99.644	0.665
dprA/cilB/dalA	Streptococcus mitis SK321	57.5	99.644	0.573
dprA/cilB/dalA	Streptococcus pneumoniae Rx1	57.143	99.644	0.569
dprA/cilB/dalA	Streptococcus pneumoniae D39	57.143	99.644	0.569
dprA/cilB/dalA	Streptococcus pneumoniae R6	57.143	99.644	0.569
dprA/cilB/dalA	Streptococcus pneumoniae TIGR4	57.143	99.644	0.569
dprA/cilB/dalA	Streptococcus mitis NCTC 12261	56.786	99.644	0.566
dprA	Lactococcus lactis subsp. cremoris KW2	54.643	99.644	0.544