Detailed information    

insolico Bioinformatically predicted

Overview

Name   amiC   Type   Regulator
Locus tag   PO908_RS07935 Genome accession   NZ_CP117042
Coordinates   1530924..1532420 (-) Length   498 a.a.
NCBI ID   WP_003026183.1    Uniprot ID   A0AAP6BP12
Organism   Streptococcus anginosus strain CGMH_KH1     
Function   internalize XIP (predicted from homology)   
Competence regulation

Genomic Context

Location: 1525924..1537420
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  PO908_RS07910 (PO908_07885) - 1525982..1526947 (+) 966 WP_003026172.1 LacI family DNA-binding transcriptional regulator -
  PO908_RS07915 (PO908_07890) - 1527021..1527845 (-) 825 WP_021002027.1 Cof-type HAD-IIB family hydrolase -
  PO908_RS07920 (PO908_07895) amiF 1527988..1528911 (-) 924 WP_003031730.1 ATP-binding cassette domain-containing protein Regulator
  PO908_RS07925 (PO908_07900) amiE 1528922..1529989 (-) 1068 WP_021002028.1 ABC transporter ATP-binding protein Regulator
  PO908_RS07930 (PO908_07905) amiD 1529998..1530924 (-) 927 WP_003026180.1 oligopeptide ABC transporter permease OppC Regulator
  PO908_RS07935 (PO908_07910) amiC 1530924..1532420 (-) 1497 WP_003026183.1 ABC transporter permease Regulator
  PO908_RS07940 (PO908_07915) amiA3 1532797..1534776 (-) 1980 WP_394467941.1 peptide ABC transporter substrate-binding protein Regulator
  PO908_RS07945 (PO908_07920) amiA3 1534974..1536950 (-) 1977 WP_021002030.1 peptide ABC transporter substrate-binding protein Regulator

Sequence

Protein


Download         Length: 498 a.a.        Molecular weight: 55875.99 Da        Isoelectric Point: 10.0807

>NTDB_id=782267 PO908_RS07935 WP_003026183.1 1530924..1532420(-) (amiC) [Streptococcus anginosus strain CGMH_KH1]
MKKYIFMRILRSLVSIFMVTTLTYTIIYTMVPRKLIFKQDPNYNKIATTPDKKANYENTIFERMGYIDYYDTKELQEKAS
KENSSVTVEPTNANKKIYEAYIKKLGRGWKLQQFKESKQFYATREVPVYERVLGFYGNLIQIDHTGAVKDASNPNLKRYI
RIENDPAIGWSVVGSGTRHKYLLYFNSQFPFIHQNFVRLNLGTSYPTYANLPVLQVISQGQGQTKTSEVQFPTGKKTSSV
NIYTRTYKSPKQADARDVANYGKDDPYTATESNYQYPSMIVSSSIVGLIGLALSYLIAVPLGSYMARFKNTLFDSISTGA
LTFLMSLPTIALVYIIRLIGSAIGLPDSFPILGAGDWRSYVLPAVILGLLSAPWTAVWIRRYMIDLQSQDFVRFARAKGL
SEKEISNKHIFKNAMVPLVSSIPNSVIGVITGATLTETVFAFPGMGKMLIDSVKASNNSMVVGLVFIFTCLSIFALLLGD
ILMTVLDPRIKLTSKGGK

Nucleotide


Download         Length: 1497 bp        

>NTDB_id=782267 PO908_RS07935 WP_003026183.1 1530924..1532420(-) (amiC) [Streptococcus anginosus strain CGMH_KH1]
ATGAAGAAATATATTTTTATGCGTATCTTACGCTCTTTAGTATCTATTTTCATGGTAACAACGCTGACTTACACCATTAT
CTATACCATGGTGCCTAGGAAGTTGATTTTCAAACAGGACCCAAACTATAACAAAATAGCGACAACTCCTGATAAAAAAG
CCAATTACGAAAATACGATTTTTGAGCGTATGGGTTACATTGACTACTATGATACGAAGGAATTACAAGAAAAAGCTAGT
AAAGAGAATTCCTCTGTAACAGTAGAACCTACTAATGCAAATAAAAAAATCTATGAAGCTTACATCAAAAAGCTGGGACG
CGGTTGGAAATTGCAGCAATTTAAAGAAAGCAAGCAATTTTATGCAACTCGTGAAGTTCCAGTCTATGAACGCGTTCTTG
GTTTCTATGGTAATTTGATTCAAATTGACCATACAGGTGCTGTGAAAGATGCTTCTAATCCGAATTTGAAGCGTTATATT
CGCATTGAAAATGATCCTGCTATTGGTTGGTCTGTTGTTGGTTCTGGAACAAGACATAAATATTTATTATATTTCAATAG
TCAGTTTCCATTTATTCACCAAAATTTTGTAAGATTAAATCTAGGAACTTCTTATCCGACCTATGCTAATCTTCCTGTTT
TACAGGTTATTTCACAAGGGCAAGGTCAAACGAAGACATCAGAAGTTCAATTTCCAACAGGAAAGAAAACATCATCTGTT
AATATTTATACGCGTACATATAAGTCTCCAAAACAAGCCGATGCACGCGATGTTGCTAATTACGGAAAAGATGATCCTTA
TACGGCGACAGAGAGCAATTATCAATATCCATCTATGATTGTGAGTTCTTCTATTGTTGGGTTGATTGGTTTGGCCTTGT
CATACTTAATCGCCGTTCCACTTGGATCTTATATGGCTCGCTTTAAGAATACATTGTTTGATAGTATTTCAACCGGTGCT
TTGACTTTCTTAATGTCACTGCCAACTATTGCCTTGGTTTATATCATTCGCTTGATTGGTTCAGCGATTGGCTTGCCTGA
TTCATTCCCTATTTTGGGAGCAGGTGATTGGCGCTCTTATGTGTTGCCGGCAGTCATTCTTGGACTCTTGAGTGCGCCTT
GGACAGCCGTTTGGATTCGCCGTTATATGATTGACTTGCAATCACAAGATTTTGTTCGTTTTGCACGTGCAAAAGGTCTT
TCTGAAAAAGAAATTTCTAATAAACATATTTTCAAAAATGCCATGGTGCCACTTGTATCCAGCATTCCAAACTCAGTTAT
TGGGGTTATTACAGGTGCAACTTTGACTGAAACAGTCTTCGCTTTCCCTGGTATGGGTAAGATGTTGATTGACTCTGTTA
AAGCTTCAAACAATTCTATGGTCGTTGGTCTTGTCTTTATCTTTACTTGTCTTTCTATCTTCGCTCTTTTATTGGGTGAT
ATTCTGATGACAGTGCTTGACCCACGTATTAAATTAACATCAAAAGGAGGTAAATAA

Domains

Predicted by InterproScan.

Binding-protein-dependent transport system inner membrane component (BPD_transp_1)

(298-491)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  amiC Streptococcus salivarius strain HSISS4

80.321

100

0.803
  amiC Streptococcus thermophilus LMG 18311

79.92

100

0.799
  amiC Streptococcus thermophilus LMD-9

79.719

100

0.797