Detailed information    

insolico Bioinformatically predicted

Overview


Name   amiE   Type   Regulator
Locus tag   PO908_RS07925 Genome accession   NZ_CP117042
Coordinates   1528922..1529989 (-) Length   355 a.a.
NCBI ID   WP_021002028.1    Uniprot ID   A0A0P0N9Y1
Organism   Streptococcus anginosus strain CGMH_KH1     
Function   internalize XIP (predicted from homology)   
Competence regulation

Genomic Context


Location: 1523922..1534989
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  PO908_RS07905 (PO908_07880) - 1524544..1526001 (+) 1458 WP_021002026.1 sucrose-6-phosphate hydrolase -
  PO908_RS07910 (PO908_07885) - 1525982..1526947 (+) 966 WP_003026172.1 LacI family DNA-binding transcriptional regulator -
  PO908_RS07915 (PO908_07890) - 1527021..1527845 (-) 825 WP_021002027.1 Cof-type HAD-IIB family hydrolase -
  PO908_RS07920 (PO908_07895) amiF 1527988..1528911 (-) 924 WP_003031730.1 ATP-binding cassette domain-containing protein Regulator
  PO908_RS07925 (PO908_07900) amiE 1528922..1529989 (-) 1068 WP_021002028.1 ABC transporter ATP-binding protein Regulator
  PO908_RS07930 (PO908_07905) amiD 1529998..1530924 (-) 927 WP_003026180.1 oligopeptide ABC transporter permease OppC Regulator
  PO908_RS07935 (PO908_07910) amiC 1530924..1532420 (-) 1497 WP_003026183.1 ABC transporter permease Regulator
  PO908_RS07940 (PO908_07915) amiA3 1532797..1534776 (-) 1980 WP_394467941.1 peptide ABC transporter substrate-binding protein Regulator

Sequence


Protein


Download         Length: 355 a.a.        Molecular weight: 39704.45 Da        Isoelectric Point: 4.7399

>NTDB_id=782265 PO908_RS07925 WP_021002028.1 1528922..1529989(-) (amiE) [Streptococcus anginosus strain CGMH_KH1]
MTQEKNVILTARDIVVEFDVRDKVLTAIRGVSLDLIEGEVLALVGESGSGKSVLTKTFTGMLEENGRVAQGTIDYRGQDL
TKLKSNKDWEPIRGVKIATIFQDPMTSLDPINTIGSQITEVIIKHQKKTPKEAKEMAVDYMNKVGIPDAEKRFNEYPFQY
SGGMRQRIVIAIALACRPDILICDEPTTALDVTIQAQIIDLLKSLQQEYQFTTIFITHDLGVVASIADKVAVMYAGEIVE
YGTVEEVFYDPRHPYTWSLLSSLPQLADDKGELYSIPGTPPSLYSHLQGDAFALRSDYAMEIDFEEKPPQIYVSDTHWAK
TWLLHENAPKVNKPAVIDDLHEKISLKMGFAHLDA

Nucleotide


Download         Length: 1068 bp        

>NTDB_id=782265 PO908_RS07925 WP_021002028.1 1528922..1529989(-) (amiE) [Streptococcus anginosus strain CGMH_KH1]
ATGACACAAGAAAAAAATGTAATATTGACTGCTCGCGATATTGTCGTGGAATTTGACGTTCGTGATAAAGTCTTAACAGC
CATTCGTGGTGTTTCGCTTGACCTTATTGAAGGTGAGGTTCTTGCACTTGTAGGAGAATCTGGTTCTGGTAAGTCTGTTT
TGACAAAGACATTTACAGGAATGTTAGAGGAAAATGGTCGAGTTGCTCAAGGAACGATTGATTACCGTGGACAAGATTTG
ACAAAATTGAAGTCTAATAAAGATTGGGAACCTATACGCGGTGTTAAAATTGCAACAATCTTCCAAGATCCGATGACGAG
TTTGGACCCTATTAACACAATTGGTAGCCAAATTACAGAAGTAATTATCAAGCACCAAAAGAAAACGCCAAAAGAAGCAA
AAGAAATGGCTGTTGACTATATGAATAAGGTCGGCATTCCTGATGCTGAAAAGCGTTTTAATGAATACCCATTCCAATAT
TCAGGGGGAATGCGTCAACGGATTGTTATTGCCATTGCACTTGCTTGTCGTCCAGATATTCTAATCTGTGATGAGCCTAC
GACAGCGCTGGATGTTACCATTCAAGCGCAAATCATTGATTTGTTGAAATCATTGCAACAAGAGTATCAATTCACCACTA
TTTTTATCACCCACGATCTTGGAGTGGTAGCAAGTATTGCAGATAAGGTTGCGGTTATGTATGCTGGTGAAATCGTTGAA
TACGGAACAGTAGAAGAAGTCTTTTACGATCCACGTCATCCTTACACTTGGAGTTTGTTATCTAGTCTGCCTCAGTTGGC
AGATGATAAGGGTGAGTTGTATTCAATTCCTGGAACGCCGCCATCTCTCTATTCACATTTACAAGGAGATGCATTTGCTC
TCCGCTCAGACTATGCGATGGAAATTGATTTTGAGGAAAAACCGCCTCAAATCTATGTGTCAGATACGCATTGGGCAAAA
ACATGGTTGCTTCATGAAAATGCTCCAAAAGTGAATAAACCTGCTGTTATTGATGATTTGCACGAAAAAATTAGCTTAAA
AATGGGCTTTGCCCATTTAGACGCCTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A0P0N9Y1

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  amiE Streptococcus salivarius strain HSISS4

86.402

99.437

0.859

  amiE Streptococcus thermophilus LMG 18311

84.986

99.437

0.845

  amiE Streptococcus thermophilus LMD-9

84.986

99.437

0.845

  oppD Streptococcus mutans UA159

56.215

99.718

0.561