Detailed information NTG0779746

Bioinformatically predicted

Overview

• Name: comGD
• Type: Machinery gene
• Locus tag: QYM42_RS11555
• Genome accession: NZ_CP129526
• Coordinates: 2316643..2317059 (-)
• Length: 138 a.a.
• NCBI ID: WP_032941843.1
• Uniprot ID: -
• Organism: Lactococcus lactis strain ZZ-2
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2311643..2322059

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QYM42_RS11515 (QYM42_11515)	-	2311665..2312531 (+)	867	WP_251899925.1	RluA family pseudouridine synthase	-
QYM42_RS11520 (QYM42_11520)	-	2312569..2313378 (-)	810	WP_014570791.1	metal ABC transporter permease	-
QYM42_RS11525 (QYM42_11525)	-	2313371..2314108 (-)	738	WP_012898617.1	metal ABC transporter ATP-binding protein	-
QYM42_RS11530 (QYM42_11530)	-	2314285..2315127 (-)	843	WP_015427160.1	metal ABC transporter substrate-binding protein	-
QYM42_RS11535 (QYM42_11535)	-	2315124..2315561 (-)	438	WP_201248645.1	zinc-dependent MarR family transcriptional regulator	-
QYM42_RS11540 (QYM42_11540)	comGG	2315643..2315927 (-)	285	WP_025017139.1	competence type IV pilus minor pilin ComGG	Machinery gene
QYM42_RS11545 (QYM42_11545)	comGF	2315966..2316412 (-)	447	WP_029344525.1	competence type IV pilus minor pilin ComGF	Machinery gene
QYM42_RS11550 (QYM42_11550)	comGE	2316375..2316671 (-)	297	WP_010906316.1	competence type IV pilus minor pilin ComGE	Machinery gene
QYM42_RS11555 (QYM42_11555)	comGD	2316643..2317059 (-)	417	WP_032941843.1	competence type IV pilus minor pilin ComGD	Machinery gene
QYM42_RS11560 (QYM42_11560)	comGC	2317034..2317303 (-)	270	WP_021721869.1	competence type IV pilus major pilin ComGC	Machinery gene
QYM42_RS11570 (QYM42_11570)	-	2317797..2317997 (-)	201	WP_058203534.1	cold-shock protein	-
QYM42_RS11575 (QYM42_11575)	-	2319243..2319686 (-)	444	WP_301675256.1	type II toxin-antitoxin system PemK/MazF family toxin	-
QYM42_RS11580 (QYM42_11580)	-	2319713..2320525 (-)	813	WP_301675257.1	DUF3800 domain-containing protein	-
QYM42_RS11585 (QYM42_11585)	-	2320638..2320814 (-)	177	WP_301675258.1	hypothetical protein	-
QYM42_RS11590 (QYM42_11590)	-	2320893..2321171 (-)	279	WP_301675259.1	hypothetical protein	-
QYM42_RS11595 (QYM42_11595)	-	2321253..2322032 (-)	780	WP_301675260.1	peptidoglycan amidohydrolase family protein	-

Sequence

Protein

• Length: 138 a.a.
• Molecular weight: 15916.68 Da
• Isoelectric Point: 7.9840

>NTDB_id=779746 QYM42_RS11555 WP_032941843.1 2316643..2317059(-) (comGD) [Lactococcus lactis strain ZZ-2]
MKNEILMTRAFTLLESLLVLLIISFITTLFSLEIIQTVHLFKGELFVLQFENFYKRSQEDAALLQKSESLVAKNQELICE
DRSITIPKEVAVKDFTVKFDDKGENSSLQKLTISLPYEKKFITYQLEIGSGKFKKKIS

Nucleotide

• Length: 417 bp

>NTDB_id=779746 QYM42_RS11555 WP_032941843.1 2316643..2317059(-) (comGD) [Lactococcus lactis strain ZZ-2]
ATGAAGAACGAAATTTTAATGACTAGAGCATTTACTTTACTAGAGTCTCTTCTAGTTTTGTTGATTATTTCTTTTATCAC
AACTCTTTTTTCTTTAGAAATAATACAAACAGTCCATCTTTTTAAGGGAGAATTGTTTGTTCTCCAGTTTGAAAATTTCT
ATAAAAGGAGTCAAGAAGATGCTGCACTGCTTCAAAAATCTGAAAGTTTAGTTGCTAAAAATCAAGAATTAATCTGTGAA
GATAGAAGTATCACAATTCCAAAGGAGGTAGCAGTTAAAGATTTTACAGTTAAATTTGATGATAAGGGAGAGAATTCTAG
CTTACAAAAACTCACAATTTCTTTACCTTACGAAAAAAAGTTCATCACTTATCAATTGGAGATAGGCAGTGGAAAATTTA
AAAAGAAAATCAGTTAA

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGD	Lactococcus lactis subsp. cremoris KW2	67.391	100	0.674
comGD	Streptococcus gordonii str. Challis substr. CH1	39.695	94.928	0.377
comGD	Streptococcus mutans UA140	39.844	92.754	0.37
comGD	Streptococcus mutans UA159	39.844	92.754	0.37