Detailed information    

insolico Bioinformatically predicted

Overview


Name   htrA   Type   Regulator
Locus tag   POF64_RS10865 Genome accession   NZ_CP116713
Coordinates   2124292..2125521 (+) Length   409 a.a.
NCBI ID   WP_000728356.1    Uniprot ID   -
Organism   Streptococcus agalactiae strain A909 Cas9 AEKOrevertant     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 2119292..2130521
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  POF64_RS10840 (POF64_10840) - 2120452..2123031 (+) 2580 WP_000154432.1 YfhO family protein -
  POF64_RS10860 (POF64_10860) rlmH 2123612..2124091 (-) 480 WP_000768335.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  POF64_RS10865 (POF64_10865) htrA 2124292..2125521 (+) 1230 WP_000728356.1 trypsin-like peptidase domain-containing protein Regulator
  POF64_RS10870 (POF64_10870) spo0J 2125619..2126392 (+) 774 WP_000456088.1 ParB/RepB/Spo0J family partition protein Regulator

Sequence


Protein


Download         Length: 409 a.a.        Molecular weight: 43104.56 Da        Isoelectric Point: 9.5271

>NTDB_id=779602 POF64_RS10865 WP_000728356.1 2124292..2125521(+) (htrA) [Streptococcus agalactiae strain A909 Cas9 AEKOrevertant]
MKKKLVSSLLKCSLIIIVSFAGGAFASFVMNHNDNIPNGGVTKTSKVNYNNITPTTKAVKKVQNSVVSVINYKQQESRSD
LSDFYSHFFGNQGGNTDKGLQVYGEGSGVIYKKDGKNAYVVTNNHVIDGAKQIEIQLADGSKAVGKLVGSDTYSDLAVVK
IPSDKVSNIAEFADSSKLNIGETAIAIGSPLGTEYANSVTQGIVSSLKRTVTMTNEEGQTVSTNAIQTDAAINPGNSGGA
LINIEGQVIGINSSKISSTSNQTSGQSSGNSVEGMGFAIPSNDVVKIINQLESNGQVERPALGISMAGLSNLPSDVISKL
KIPSNVTNGIVVASIQSGMPAQGKLKKYDVITKVDDKEVASPSDLQSLLYGHQVGDSITVTFYRGENKQTITIKLTKTSK
DLAKQRANN

Nucleotide


Download         Length: 1230 bp        

>NTDB_id=779602 POF64_RS10865 WP_000728356.1 2124292..2125521(+) (htrA) [Streptococcus agalactiae strain A909 Cas9 AEKOrevertant]
GTGAAAAAAAAATTAGTCTCATCACTTCTAAAGTGTTCTCTAATCATTATTGTTAGCTTTGCTGGTGGAGCATTTGCTAG
TTTTGTCATGAATCATAATGACAATATTCCAAATGGTGGTGTCACTAAAACTAGTAAAGTAAATTATAATAACATAACGC
CTACAACAAAAGCTGTTAAAAAGGTACAAAATAGTGTTGTTTCTGTTATCAATTATAAACAACAAGAGAGTCGTTCTGAC
CTATCAGACTTCTATAGTCATTTTTTTGGTAATCAGGGGGGCAACACTGATAAGGGCTTACAAGTTTACGGTGAAGGCTC
TGGAGTCATCTATAAAAAAGATGGTAAAAATGCCTATGTTGTCACTAATAACCACGTCATTGATGGGGCTAAACAAATTG
AAATTCAACTAGCTGATGGCTCAAAAGCAGTTGGGAAACTTGTTGGGTCAGATACCTACTCTGATTTAGCCGTCGTCAAA
ATTCCATCAGATAAGGTTTCAAATATTGCAGAATTTGCTGATTCATCAAAACTCAACATTGGTGAAACTGCTATAGCGAT
CGGAAGCCCTCTTGGAACTGAGTATGCAAATTCTGTAACTCAAGGTATTGTATCTAGTTTAAAAAGAACTGTAACAATGA
CTAATGAAGAAGGACAAACAGTTTCTACAAATGCTATCCAGACTGATGCTGCTATCAATCCTGGTAATTCAGGTGGAGCA
CTTATCAATATTGAAGGACAGGTTATTGGAATTAATTCTAGTAAAATTTCTTCTACATCAAATCAAACCTCAGGACAATC
GTCAGGAAATAGCGTTGAAGGTATGGGATTTGCCATTCCTTCAAATGATGTTGTTAAGATTATCAATCAACTTGAGAGTA
ACGGACAAGTAGAGAGACCTGCTCTAGGTATTTCTATGGCTGGATTAAGTAATTTACCATCCGATGTTATTAGTAAACTG
AAAATCCCAAGTAATGTTACTAATGGTATTGTAGTAGCATCTATCCAATCTGGCATGCCAGCTCAAGGCAAACTAAAGAA
ATACGATGTCATTACTAAAGTTGACGATAAAGAAGTAGCATCTCCAAGTGATTTACAAAGTTTACTCTATGGCCACCAGG
TAGGAGATTCCATAACAGTAACCTTTTACCGTGGTGAAAATAAACAAACAATCACTATAAAACTTACTAAAACTAGTAAA
GATTTAGCTAAACAACGAGCAAATAACTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  htrA Streptococcus mutans UA159

63.104

96.088

0.606

  htrA Streptococcus gordonii str. Challis substr. CH1

57.357

98.044

0.562

  htrA Streptococcus mitis NCTC 12261

56.533

97.311

0.55

  htrA Streptococcus pneumoniae TIGR4

55.037

99.511

0.548

  htrA Streptococcus pneumoniae Rx1

55.037

99.511

0.548

  htrA Streptococcus pneumoniae D39

55.037

99.511

0.548

  htrA Streptococcus pneumoniae R6

55.037

99.511

0.548