Detailed information NTG0777499

Bioinformatically predicted

Overview

• Name: comM
• Type: Machinery gene
• Locus tag: O1Q74_RS18940
• Genome accession: NZ_CP116477
• Coordinates: 4110722..4112248 (+)
• Length: 508 a.a.
• NCBI ID: WP_271875044.1
• Uniprot ID: -
• Organism: Pectobacterium sp. A5351
• Function: require for natural transformation (predicted from homology) Unclear

Genomic Context

Location: 4105722..4117248

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
O1Q74_RS18920 (O1Q74_18920)	-	4107140..4108066 (-)	927	WP_225086140.1	branched-chain amino acid transaminase	-
O1Q74_RS18925 (O1Q74_18925)	ilvM	4108092..4108352 (-)	261	WP_005969103.1	acetolactate synthase 2 small subunit	-
O1Q74_RS18930 (O1Q74_18930)	ilvG	4108429..4110075 (-)	1647	WP_271875043.1	acetolactate synthase 2 catalytic subunit	-
O1Q74_RS18935 (O1Q74_18935)	ilvL	4110216..4110314 (-)	99	WP_071531109.1	ilv operon leader peptide	-
O1Q74_RS18940 (O1Q74_18940)	comM	4110722..4112248 (+)	1527	WP_271875044.1	YifB family Mg chelatase-like AAA ATPase	Machinery gene
O1Q74_RS18945 (O1Q74_18945)	-	4112306..4112644 (-)	339	WP_102119500.1	DUF413 domain-containing protein	-
O1Q74_RS18950 (O1Q74_18950)	hdfR	4112765..4113592 (+)	828	WP_271875045.1	HTH-type transcriptional regulator HdfR	-
O1Q74_RS18955 (O1Q74_18955)	yjfF	4113613..4114575 (-)	963	WP_271875046.1	galactofuranose ABC transporter, permease protein YjfF	-
O1Q74_RS18960 (O1Q74_18960)	ytfT	4114575..4115585 (-)	1011	WP_271875047.1	galactofuranose ABC transporter, ATP-binding protein YtfT	-
O1Q74_RS18965 (O1Q74_18965)	ytfR	4115572..4117092 (-)	1521	WP_271875048.1	galactofuranose ABC transporter, ATP-binding protein YtfR	-

Sequence

Protein

• Length: 508 a.a.
• Molecular weight: 55463.10 Da
• Isoelectric Point: 6.7747

>NTDB_id=777499 O1Q74_RS18940 WP_271875044.1 4110722..4112248(+) (comM) [Pectobacterium sp. A5351]
MSLAVTYTRAMIGVQAPDVYIEVHISSGLPALTLVGLPETTVKEARDRVRSALINCGFTFPAKRITVNLAPADLPKEGGR
YDLPIALAILAASEQIDGEKLSRYEFLGELGLSGTLRGVNGAIPAALEAIKSGRQLILPDDNKREMTLIPQGEALMAGHL
LEVCAFLSGEEELLSCSDIVPTPQSEEDALDLKDIIGQEQAKRALEIAAAGGHNLLLLGPPGTGKTMLASRLGNLMPPLS
DEEALESAAINSLINIDATMTRWRARPFRAPHHSSSMAALVGGGSLPKPGEISLAHNGVLFLDELPEFERRVLDSLREPL
ESGEIIISRTRAKVCYPARVQLVAAMNPSPSGHYQGIHNRLPAQQILRYLSKLSGPFLDRFDLSIEVPLLPPGVLSQQYY
QGESSATIRERVLIARQIQLKRANKINALLTSREIEKHCTLEAPDAAYLEEVMNKLGLSVRAWHRILKVARTIADLGDRG
SIERKHLAEALSYRCMDRLLIKLHRSLE

Nucleotide

• Length: 1527 bp

>NTDB_id=777499 O1Q74_RS18940 WP_271875044.1 4110722..4112248(+) (comM) [Pectobacterium sp. A5351]
ATGTCATTGGCAGTTACCTATACTCGGGCAATGATTGGTGTACAAGCACCGGACGTTTATATCGAAGTTCACATCAGCAG
CGGGCTACCGGCTCTGACGCTGGTTGGCTTACCAGAAACTACCGTCAAAGAAGCACGCGATCGCGTGCGCAGCGCACTCA
TCAATTGTGGGTTTACCTTTCCAGCCAAACGCATCACGGTCAACCTCGCCCCCGCAGATCTACCGAAAGAAGGGGGACGC
TACGACCTACCGATTGCTCTGGCGATTCTGGCGGCATCGGAACAAATCGATGGGGAAAAGCTAAGCCGCTACGAGTTTCT
TGGTGAACTCGGCCTGTCTGGCACCTTACGTGGCGTTAATGGCGCGATTCCCGCCGCCCTGGAGGCCATCAAGTCAGGTC
GCCAGCTTATCCTGCCAGATGACAATAAACGGGAGATGACACTGATACCGCAGGGTGAGGCACTCATGGCCGGGCACTTG
TTGGAAGTGTGTGCTTTTCTCAGCGGAGAAGAGGAATTGCTCAGTTGCTCCGACATCGTACCAACTCCGCAGTCAGAAGA
AGATGCGCTCGACCTGAAGGATATCATCGGTCAGGAGCAGGCTAAGCGCGCGCTGGAAATTGCGGCGGCTGGTGGCCACA
ATCTGCTATTGCTGGGGCCGCCGGGAACAGGGAAAACCATGCTGGCAAGCCGATTAGGCAATCTGATGCCACCATTAAGC
GACGAAGAAGCGCTGGAAAGCGCCGCCATCAATAGCCTCATTAACATCGATGCCACCATGACGCGCTGGCGAGCCAGGCC
ATTCCGAGCACCTCATCATAGTTCCTCCATGGCTGCGCTCGTGGGCGGAGGGTCGTTGCCTAAACCAGGGGAGATTTCAC
TCGCCCACAACGGCGTGCTGTTTCTGGATGAGTTACCGGAGTTTGAGCGACGCGTTTTAGACTCACTACGAGAGCCTCTG
GAGTCCGGTGAAATTATCATTTCCCGCACGCGCGCCAAAGTGTGCTACCCGGCACGCGTACAGCTCGTCGCCGCAATGAA
CCCCAGCCCGTCAGGCCACTATCAGGGCATTCATAACCGATTACCCGCACAACAAATACTGCGCTACCTCAGCAAACTTT
CCGGTCCCTTTTTGGATCGCTTTGACCTTTCTATCGAAGTTCCTTTGCTACCACCAGGGGTTTTATCTCAGCAATATTAT
CAGGGAGAAAGCAGCGCGACGATTCGCGAACGCGTACTGATCGCACGGCAGATACAGTTAAAACGGGCAAATAAAATCAA
CGCACTACTCACCTCACGCGAAATAGAAAAACACTGTACGTTAGAGGCACCTGATGCGGCTTATCTGGAAGAAGTGATGA
ACAAACTTGGCTTATCCGTACGCGCCTGGCACCGGATATTGAAAGTCGCCCGCACAATCGCAGATCTCGGCGATCGGGGC
AGCATAGAGAGAAAACATCTTGCCGAAGCGCTGAGCTATCGCTGTATGGACCGATTGCTCATCAAGCTCCACAGAAGCCT
TGAATAG

Domains

Predicted by InterproScan.

• Subunit ChlI of Mg-chelatase (ChlI) (21-142)

• Magnesium chelatase, subunit ChlI C-terminal (Mg_chelatase_C) (402-494)

• Magnesium chelatase, subunit ChlI (Mg_chelatase) (191-390)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comM	Haemophilus influenzae Rd KW20	64.427	99.606	0.642
comM	Vibrio cholerae strain A1552	63.817	99.016	0.632
comM	Glaesserella parasuis strain SC1401	62.919	99.803	0.628
comM	Vibrio campbellii strain DS40M4	62.846	99.606	0.626
comM	Legionella pneumophila str. Paris	50.501	98.228	0.496
comM	Legionella pneumophila strain ERS1305867	50.501	98.228	0.496
RA0C_RS07335	Riemerella anatipestifer ATCC 11845 = DSM 15868	46.05	100	0.47