Detailed information
Bioinformatically predicted
Overview
| Name | comEA | Type | Machinery gene |
| Locus tag | PI861_RS03860 | Genome accession | NZ_CP116263 |
| Coordinates | 808028..808348 (+) | Length | 106 a.a. |
| NCBI ID | WP_005318073.1 | Uniprot ID | A4SJ96 |
| Organism | Aeromonas salmonicida subsp. salmonicida strain J228 | ||
| Function | dsDNA binding (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 803028..813348
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PI861_RS03835 (PI861_03835) | trhA | 803653..804288 (-) | 636 | WP_005318058.1 | PAQR family membrane homeostasis protein TrhA | - |
| PI861_RS03840 (PI861_03840) | - | 804513..806048 (+) | 1536 | WP_005318060.1 | pyridoxal-dependent decarboxylase | - |
| PI861_RS03845 (PI861_03845) | - | 806134..806685 (+) | 552 | WP_005318063.1 | septation protein A | - |
| PI861_RS03850 (PI861_03850) | - | 806712..807008 (+) | 297 | WP_005318066.1 | YciI family protein | - |
| PI861_RS03855 (PI861_03855) | cysQ | 807090..807860 (-) | 771 | WP_005318069.1 | 3'(2'),5'-bisphosphate nucleotidase CysQ | - |
| PI861_RS03860 (PI861_03860) | comEA | 808028..808348 (+) | 321 | WP_005318073.1 | ComEA family DNA-binding protein | Machinery gene |
| PI861_RS03865 (PI861_03865) | galU | 808443..809354 (+) | 912 | WP_005318075.1 | UTP--glucose-1-phosphate uridylyltransferase GalU | - |
| PI861_RS03870 (PI861_03870) | - | 809568..810965 (+) | 1398 | WP_011898384.1 | peptide MFS transporter | - |
| PI861_RS03875 (PI861_03875) | - | 810997..811968 (-) | 972 | WP_011898383.1 | response regulator | - |
| PI861_RS03880 (PI861_03880) | - | 812322..813020 (+) | 699 | WP_005318084.1 | DnaT-like ssDNA-binding domain-containing protein | - |
Sequence
Protein
Download Length: 106 a.a. Molecular weight: 11222.15 Da Isoelectric Point: 10.0215
>NTDB_id=776441 PI861_RS03860 WP_005318073.1 808028..808348(+) (comEA) [Aeromonas salmonicida subsp. salmonicida strain J228]
MNYKILTATLLLSCLPLLSQPLLAADKPAAKPATTVTTAKESGKVNLNTASINELTALKGIGEKKAQAIVDFRQKQGKFT
TVEQLADVSGIGPATLEANRDMIIVK
MNYKILTATLLLSCLPLLSQPLLAADKPAAKPATTVTTAKESGKVNLNTASINELTALKGIGEKKAQAIVDFRQKQGKFT
TVEQLADVSGIGPATLEANRDMIIVK
Nucleotide
Download Length: 321 bp
>NTDB_id=776441 PI861_RS03860 WP_005318073.1 808028..808348(+) (comEA) [Aeromonas salmonicida subsp. salmonicida strain J228]
ATGAACTACAAAATCCTGACCGCCACCCTGCTGCTGAGCTGCCTGCCCCTGCTCAGCCAGCCTTTGCTGGCCGCCGACAA
GCCGGCTGCCAAGCCAGCGACCACGGTCACCACCGCCAAGGAGAGTGGCAAGGTGAACCTGAATACGGCCAGTATCAATG
AGTTAACTGCCCTCAAGGGGATCGGAGAGAAGAAGGCGCAGGCCATCGTCGATTTTCGTCAGAAACAGGGCAAGTTCACC
ACGGTTGAACAACTGGCGGATGTCAGCGGCATAGGGCCGGCCACTCTGGAAGCAAATCGGGACATGATCATCGTCAAATA
G
ATGAACTACAAAATCCTGACCGCCACCCTGCTGCTGAGCTGCCTGCCCCTGCTCAGCCAGCCTTTGCTGGCCGCCGACAA
GCCGGCTGCCAAGCCAGCGACCACGGTCACCACCGCCAAGGAGAGTGGCAAGGTGAACCTGAATACGGCCAGTATCAATG
AGTTAACTGCCCTCAAGGGGATCGGAGAGAAGAAGGCGCAGGCCATCGTCGATTTTCGTCAGAAACAGGGCAAGTTCACC
ACGGTTGAACAACTGGCGGATGTCAGCGGCATAGGGCCGGCCACTCTGGAAGCAAATCGGGACATGATCATCGTCAAATA
G
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comEA | Vibrio cholerae C6706 |
50 |
100 |
0.519 |
| comEA | Vibrio cholerae strain A1552 |
50 |
100 |
0.519 |
| comEA | Vibrio parahaemolyticus RIMD 2210633 |
46.392 |
91.509 |
0.425 |
| comE1/comEA | Haemophilus influenzae Rd KW20 |
42.453 |
100 |
0.425 |
| comEA/comE1 | Glaesserella parasuis strain SC1401 |
61.905 |
59.434 |
0.368 |