Detailed information    

insolico Bioinformatically predicted

Overview

Name   htrA   Type   Regulator
Locus tag   PEZ80_RS04560 Genome accession   NZ_CP116026
Coordinates   962387..963691 (-) Length   434 a.a.
NCBI ID   WP_271292475.1    Uniprot ID   -
Organism   Enterococcus casseliflavus strain CQFYY22-063     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 957387..968691
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  PEZ80_RS04530 (PEZ80_04530) - 957415..958449 (+) 1035 WP_271292473.1 hypothetical protein -
  PEZ80_RS04535 (PEZ80_04535) - 958510..958854 (-) 345 WP_271292474.1 hypothetical protein -
  PEZ80_RS04540 (PEZ80_04540) pepA 959147..960223 (+) 1077 WP_005225427.1 glutamyl aminopeptidase -
  PEZ80_RS04545 (PEZ80_04545) - 960357..960677 (+) 321 WP_026008043.1 thioredoxin family protein -
  PEZ80_RS04550 (PEZ80_04550) - 960690..961151 (+) 462 WP_005225429.1 universal stress protein -
  PEZ80_RS04555 (PEZ80_04555) ytpR 961704..962318 (+) 615 WP_005225431.1 YtpR family tRNA-binding protein -
  PEZ80_RS04560 (PEZ80_04560) htrA 962387..963691 (-) 1305 WP_271292475.1 trypsin-like peptidase domain-containing protein Regulator
  PEZ80_RS04565 (PEZ80_04565) rlmH 964065..964544 (+) 480 WP_008379108.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  PEZ80_RS04570 (PEZ80_04570) - 964683..966332 (+) 1650 WP_271292476.1 AAA family ATPase -
  PEZ80_RS04575 (PEZ80_04575) - 966322..967614 (+) 1293 WP_271292477.1 guanosine 5'-monophosphate oxidoreductase -
  PEZ80_RS04580 (PEZ80_04580) truA 967739..968476 (+) 738 WP_005225435.1 tRNA pseudouridine(38-40) synthase TruA -

Sequence

Protein


Download         Length: 434 a.a.        Molecular weight: 44866.32 Da        Isoelectric Point: 4.0084

>NTDB_id=775383 PEZ80_RS04560 WP_271292475.1 962387..963691(-) (htrA) [Enterococcus casseliflavus strain CQFYY22-063]
MARKYVTPGKKTSPGLLKRLGIGILGGMVGGLLTFGGLYLAMGSSLTSTPETTTNSGVQDSNGQTQVSNVKLDVTSDVTE
AVEKVQDSVVSIINLQQSQSNDWNSLFGQQGGQSESDSQSDDDSALEASSEGSGVIYKIDGDDAYVVTNNHVVEGQDGLE
VVLADGTKVKAELVGTDAYTDLAVLKISSEHVTTAATFGDSSALKVGEPAIAIGSPLGSDYANSVTQGIVSSLNRQVTSQ
NESGGTISINAIQTDAAINPGNSGGPLINVDGQVIGINSSKIASTSGSASGVSVEGMGFAIPSNDVVEIINQLEADGKVV
RPALGIQTIDLGSITSQQQEQILKVPSSVTSGVVIYSVNNATPAEQAGLQQYDVITKIDDTEVSTTTDLQSALYKHKVGD
TITVTFYRGDEEKTAEVKLSVDTSINEQSTDSSN

Nucleotide


Download         Length: 1305 bp        

>NTDB_id=775383 PEZ80_RS04560 WP_271292475.1 962387..963691(-) (htrA) [Enterococcus casseliflavus strain CQFYY22-063]
ATGGCAAGAAAATATGTCACACCAGGCAAGAAAACTTCTCCTGGTTTATTAAAACGATTAGGTATTGGGATTTTAGGCGG
TATGGTCGGCGGTTTATTGACCTTCGGCGGTCTGTATCTGGCAATGGGGTCATCTTTGACTTCAACACCAGAAACCACGA
CCAACAGTGGGGTCCAAGATTCTAACGGACAAACCCAAGTATCCAATGTAAAACTTGATGTGACTAGCGATGTCACTGAG
GCAGTTGAAAAAGTACAAGATTCTGTCGTTTCCATCATTAATCTACAACAAAGTCAAAGTAACGACTGGAACAGCCTCTT
TGGTCAGCAAGGCGGACAAAGTGAAAGCGATAGCCAAAGCGACGACGACAGTGCTTTAGAAGCTTCTTCTGAAGGGAGTG
GGGTCATCTACAAAATCGATGGCGACGATGCCTATGTCGTAACCAACAACCACGTCGTTGAAGGTCAAGACGGTTTGGAA
GTTGTCTTAGCAGACGGTACGAAAGTCAAAGCTGAATTGGTCGGTACTGACGCTTACACAGACTTAGCTGTATTGAAAAT
CTCTTCAGAGCATGTGACGACTGCCGCAACATTTGGTGATTCAAGTGCCTTGAAAGTCGGCGAACCAGCCATCGCGATCG
GTTCTCCTCTCGGCTCTGACTACGCAAACTCTGTGACACAAGGGATCGTTTCTTCCTTGAATCGTCAAGTAACAAGCCAA
AACGAATCTGGTGGTACGATCAGTATCAACGCGATCCAAACGGATGCTGCGATCAACCCAGGGAACTCTGGTGGTCCACT
GATCAACGTTGATGGCCAAGTGATTGGGATCAACTCAAGTAAAATCGCCAGCACCTCGGGCTCTGCTTCAGGTGTTAGTG
TCGAAGGGATGGGCTTTGCGATCCCAAGTAACGATGTCGTTGAAATCATCAATCAACTAGAAGCAGACGGCAAAGTGGTT
CGCCCTGCACTAGGTATCCAAACGATCGATTTAGGTTCCATCACATCACAACAACAAGAACAAATCTTGAAAGTTCCTTC
ATCCGTAACTTCTGGCGTTGTGATCTATTCAGTCAACAATGCAACACCAGCAGAACAAGCAGGATTGCAACAATATGACG
TTATCACGAAGATCGATGACACAGAAGTCAGCACAACAACGGATCTGCAATCTGCGTTGTACAAACACAAAGTCGGTGAC
ACGATCACTGTAACCTTCTATCGTGGCGATGAAGAAAAAACAGCAGAAGTAAAACTTTCCGTTGATACGTCGATCAACGA
ACAATCAACGGACAGCAGCAACTAA

Domains

Predicted by InterproScan.

Peptidase family M50 (Peptidase_M50)

(19-420)

PDZ domain (PDZ_2)

(322-419)

Trypsin-like peptidase domain (Trypsin_2)

(132-277)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  htrA Streptococcus mutans UA159

56.423

91.475

0.516
  htrA Streptococcus gordonii str. Challis substr. CH1

50.835

96.544

0.491
  htrA Streptococcus mitis NCTC 12261

55.71

82.719

0.461
  htrA Streptococcus pneumoniae TIGR4

57.31

78.802

0.452
  htrA Streptococcus pneumoniae D39

57.31

78.802

0.452
  htrA Streptococcus pneumoniae Rx1

57.31

78.802

0.452
  htrA Streptococcus pneumoniae R6

57.31

78.802

0.452