Detailed information
Bioinformatically predicted
Overview
| Name | ruvB | Type | Machinery gene |
| Locus tag | QQO10_RS08990 | Genome accession | NZ_CP127021 |
| Coordinates | 1814423..1815427 (-) | Length | 334 a.a. |
| NCBI ID | WP_001005767.1 | Uniprot ID | Q6GG63 |
| Organism | Staphylococcus aureus strain CC239-MRSA-III(var.) isolate Trinidad&Tobago_2020-021_7037M | ||
| Function | homologous recombination (predicted from homology) Homologous recombination |
||
Genomic Context
Location: 1809423..1820427
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QQO10_RS08975 (QQO10_08975) | yajC | 1811955..1812215 (-) | 261 | WP_001160682.1 | preprotein translocase subunit YajC | - |
| QQO10_RS08980 (QQO10_08980) | tgt | 1812234..1813373 (-) | 1140 | WP_001112045.1 | tRNA guanosine(34) transglycosylase Tgt | - |
| QQO10_RS08985 (QQO10_08985) | queA | 1813396..1814421 (-) | 1026 | WP_001019171.1 | tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA | - |
| QQO10_RS08990 (QQO10_08990) | ruvB | 1814423..1815427 (-) | 1005 | WP_001005767.1 | Holliday junction branch migration DNA helicase RuvB | Machinery gene |
| QQO10_RS08995 (QQO10_08995) | ruvA | 1815459..1816061 (-) | 603 | WP_000271544.1 | Holliday junction branch migration protein RuvA | Machinery gene |
| QQO10_RS09000 (QQO10_09000) | - | 1816075..1816530 (-) | 456 | WP_000368902.1 | ACT domain-containing protein | - |
| QQO10_RS09005 (QQO10_09005) | obgE | 1816543..1817835 (-) | 1293 | WP_000496100.1 | GTPase ObgE | - |
| QQO10_RS09010 (QQO10_09010) | rpmA | 1818190..1818474 (-) | 285 | WP_000916187.1 | 50S ribosomal protein L27 | - |
| QQO10_RS09015 (QQO10_09015) | - | 1818486..1818806 (-) | 321 | WP_000633692.1 | ribosomal-processing cysteine protease Prp | - |
| QQO10_RS09020 (QQO10_09020) | rplU | 1818812..1819120 (-) | 309 | WP_000457385.1 | 50S ribosomal protein L21 | - |
| QQO10_RS09025 (QQO10_09025) | mreD | 1819287..1819818 (-) | 532 | Protein_1780 | rod shape-determining protein MreD | - |
Sequence
Protein
Download Length: 334 a.a. Molecular weight: 37718.00 Da Isoelectric Point: 5.0865
>NTDB_id=770109 QQO10_RS08990 WP_001005767.1 1814423..1815427(-) (ruvB) [Staphylococcus aureus strain CC239-MRSA-III(var.) isolate Trinidad&Tobago_2020-021_7037M]
MNERMVDQSMHSEETDFELSLRPTRLRQYIGQNSIKSNLEVFIKAAKLRHEPLDHVLLFGPPGLGKTTLSNIIANEMEVN
IRTVSGPSLERPGDLAAILSGLQPGDVLFIDEIHRLSSVVEEVLYPAMEDFFLDIIIGKGDEARSIRIDLPPFTLVGATT
RAGSLTGPLRDRFGVHLRLEYYNESDLKEIIIRTAEVLGTGIDEESAIELAKRSRGTPRVANRLLKRVRDFQQVNEDEQI
YIETTKHALGLLQVDQHGLDYIDHKMMNCIIKQYNGGPVGLDTIAVTIGEERITIEDVYEPFLIQKGFLERTPRGRKATP
LAYEHFAKSNEERE
MNERMVDQSMHSEETDFELSLRPTRLRQYIGQNSIKSNLEVFIKAAKLRHEPLDHVLLFGPPGLGKTTLSNIIANEMEVN
IRTVSGPSLERPGDLAAILSGLQPGDVLFIDEIHRLSSVVEEVLYPAMEDFFLDIIIGKGDEARSIRIDLPPFTLVGATT
RAGSLTGPLRDRFGVHLRLEYYNESDLKEIIIRTAEVLGTGIDEESAIELAKRSRGTPRVANRLLKRVRDFQQVNEDEQI
YIETTKHALGLLQVDQHGLDYIDHKMMNCIIKQYNGGPVGLDTIAVTIGEERITIEDVYEPFLIQKGFLERTPRGRKATP
LAYEHFAKSNEERE
Nucleotide
Download Length: 1005 bp
>NTDB_id=770109 QQO10_RS08990 WP_001005767.1 1814423..1815427(-) (ruvB) [Staphylococcus aureus strain CC239-MRSA-III(var.) isolate Trinidad&Tobago_2020-021_7037M]
ATGAATGAGCGTATGGTTGATCAATCAATGCATAGTGAAGAAACTGATTTCGAATTGTCGCTTAGACCTACGAGATTACG
ACAATATATTGGTCAAAATTCAATAAAAAGTAATTTAGAAGTATTTATTAAAGCGGCTAAACTTCGTCATGAACCATTAG
ATCATGTATTGCTTTTTGGCCCCCCTGGATTAGGTAAGACAACATTATCTAATATCATTGCCAATGAAATGGAAGTTAAT
ATACGTACAGTATCAGGGCCTTCATTAGAAAGACCTGGTGATTTGGCTGCAATTTTATCAGGACTTCAACCTGGAGATGT
TTTGTTTATTGATGAAATACACAGACTGAGTAGTGTTGTTGAAGAAGTGTTATACCCTGCAATGGAAGATTTCTTTTTAG
ATATTATCATTGGTAAAGGCGATGAGGCTAGAAGTATCCGTATCGACTTACCTCCATTCACTTTGGTAGGTGCAACAACG
CGAGCTGGCAGCTTAACAGGTCCACTAAGGGATCGATTTGGTGTGCACTTAAGATTAGAATATTATAACGAATCAGATTT
AAAAGAAATCATTATTAGAACAGCTGAGGTTTTAGGCACAGGTATTGATGAAGAAAGTGCCATTGAACTTGCTAAACGTT
CTAGAGGGACTCCAAGAGTAGCAAATCGACTATTGAAGCGGGTAAGAGACTTCCAGCAAGTGAATGAAGATGAACAAATA
TACATTGAAACAACGAAGCACGCATTAGGTTTACTTCAAGTTGATCAACACGGACTAGATTACATTGATCATAAAATGAT
GAACTGTATTATTAAGCAGTATAATGGCGGACCTGTTGGTTTAGATACGATTGCCGTAACAATTGGTGAAGAACGTATTA
CAATTGAGGACGTTTATGAGCCATTTCTTATTCAGAAAGGCTTTTTAGAACGTACGCCACGTGGCAGAAAAGCAACACCA
TTAGCTTATGAACATTTTGCAAAGTCGAATGAGGAGAGAGAATAA
ATGAATGAGCGTATGGTTGATCAATCAATGCATAGTGAAGAAACTGATTTCGAATTGTCGCTTAGACCTACGAGATTACG
ACAATATATTGGTCAAAATTCAATAAAAAGTAATTTAGAAGTATTTATTAAAGCGGCTAAACTTCGTCATGAACCATTAG
ATCATGTATTGCTTTTTGGCCCCCCTGGATTAGGTAAGACAACATTATCTAATATCATTGCCAATGAAATGGAAGTTAAT
ATACGTACAGTATCAGGGCCTTCATTAGAAAGACCTGGTGATTTGGCTGCAATTTTATCAGGACTTCAACCTGGAGATGT
TTTGTTTATTGATGAAATACACAGACTGAGTAGTGTTGTTGAAGAAGTGTTATACCCTGCAATGGAAGATTTCTTTTTAG
ATATTATCATTGGTAAAGGCGATGAGGCTAGAAGTATCCGTATCGACTTACCTCCATTCACTTTGGTAGGTGCAACAACG
CGAGCTGGCAGCTTAACAGGTCCACTAAGGGATCGATTTGGTGTGCACTTAAGATTAGAATATTATAACGAATCAGATTT
AAAAGAAATCATTATTAGAACAGCTGAGGTTTTAGGCACAGGTATTGATGAAGAAAGTGCCATTGAACTTGCTAAACGTT
CTAGAGGGACTCCAAGAGTAGCAAATCGACTATTGAAGCGGGTAAGAGACTTCCAGCAAGTGAATGAAGATGAACAAATA
TACATTGAAACAACGAAGCACGCATTAGGTTTACTTCAAGTTGATCAACACGGACTAGATTACATTGATCATAAAATGAT
GAACTGTATTATTAAGCAGTATAATGGCGGACCTGTTGGTTTAGATACGATTGCCGTAACAATTGGTGAAGAACGTATTA
CAATTGAGGACGTTTATGAGCCATTTCTTATTCAGAAAGGCTTTTTAGAACGTACGCCACGTGGCAGAAAAGCAACACCA
TTAGCTTATGAACATTTTGCAAAGTCGAATGAGGAGAGAGAATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ruvB | Bacillus subtilis subsp. subtilis str. 168 |
65.951 |
97.605 |
0.644 |
| ruvB | Streptococcus pneumoniae TIGR4 |
58.182 |
98.802 |
0.575 |
| ruvB | Streptococcus pneumoniae R6 |
57.879 |
98.802 |
0.572 |
| ruvB | Streptococcus pneumoniae D39 |
57.879 |
98.802 |
0.572 |
| ruvB | Helicobacter pylori 26695 |
56.481 |
97.006 |
0.548 |
| ruvB | Synechocystis sp. PCC 6803 |
53.75 |
95.808 |
0.515 |