Detailed information NTG0770110

Bioinformatically predicted

Overview

• Name: ruvA
• Type: Machinery gene
• Locus tag: QQO10_RS08995
• Genome accession: NZ_CP127021
• Coordinates: 1815459..1816061 (-)
• Length: 200 a.a.
• NCBI ID: WP_000271544.1
• Uniprot ID: -
• Organism: Staphylococcus aureus strain CC239-MRSA-III(var.) isolate Trinidad&Tobago_2020-021_7037M
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1810459..1821061

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QQO10_RS08975 (QQO10_08975)	yajC	1811955..1812215 (-)	261	WP_001160682.1	preprotein translocase subunit YajC	-
QQO10_RS08980 (QQO10_08980)	tgt	1812234..1813373 (-)	1140	WP_001112045.1	tRNA guanosine(34) transglycosylase Tgt	-
QQO10_RS08985 (QQO10_08985)	queA	1813396..1814421 (-)	1026	WP_001019171.1	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	-
QQO10_RS08990 (QQO10_08990)	ruvB	1814423..1815427 (-)	1005	WP_001005767.1	Holliday junction branch migration DNA helicase RuvB	Machinery gene
QQO10_RS08995 (QQO10_08995)	ruvA	1815459..1816061 (-)	603	WP_000271544.1	Holliday junction branch migration protein RuvA	Machinery gene
QQO10_RS09000 (QQO10_09000)	-	1816075..1816530 (-)	456	WP_000368902.1	ACT domain-containing protein	-
QQO10_RS09005 (QQO10_09005)	obgE	1816543..1817835 (-)	1293	WP_000496100.1	GTPase ObgE	-
QQO10_RS09010 (QQO10_09010)	rpmA	1818190..1818474 (-)	285	WP_000916187.1	50S ribosomal protein L27	-
QQO10_RS09015 (QQO10_09015)	-	1818486..1818806 (-)	321	WP_000633692.1	ribosomal-processing cysteine protease Prp	-
QQO10_RS09020 (QQO10_09020)	rplU	1818812..1819120 (-)	309	WP_000457385.1	50S ribosomal protein L21	-
QQO10_RS09025 (QQO10_09025)	mreD	1819287..1819818 (-)	532	Protein_1780	rod shape-determining protein MreD	-
QQO10_RS09030 (QQO10_09030)	mreC	1819818..1820660 (-)	843	WP_000911041.1	rod shape-determining protein MreC	-
QQO10_RS09035 (QQO10_09035)	-	1820860..1820979 (-)	120	WP_000840602.1	hypothetical protein	-

Sequence

Protein

• Length: 200 a.a.
• Molecular weight: 22236.42 Da
• Isoelectric Point: 6.2380

>NTDB_id=770110 QQO10_RS08995 WP_000271544.1 1815459..1816061(-) (ruvA) [Staphylococcus aureus strain CC239-MRSA-III(var.) isolate Trinidad&Tobago_2020-021_7037M]
MYAYVKGKLTHLYPTHVVVETAGVGYEIQTPNSYRFQKHLDHEVLIHTSLIVREDAQLLHGFSSEEEKDMFLSLIKVTGI
GPKSALAILATSTPNEVKRAIENENDTYLTKFPGIGKKTARQIVLDLKGKVKITEEDSDSLLQVDATSTVQDQFVQEAML
ALEALGYSKRELAKVEKTLNKNKYDSVDEAVKAGLQLVVS

Nucleotide

• Length: 603 bp

>NTDB_id=770110 QQO10_RS08995 WP_000271544.1 1815459..1816061(-) (ruvA) [Staphylococcus aureus strain CC239-MRSA-III(var.) isolate Trinidad&Tobago_2020-021_7037M]
ATGTACGCGTATGTCAAAGGTAAGTTAACACATTTATATCCTACACACGTAGTTGTTGAAACTGCTGGTGTTGGTTATGA
AATTCAAACACCAAATTCTTATCGTTTTCAAAAGCATCTAGATCATGAAGTTTTAATTCATACATCTTTAATTGTTCGTG
AAGATGCACAATTATTGCATGGATTTAGTAGTGAAGAAGAGAAAGATATGTTCTTGAGTTTAATTAAAGTTACTGGTATT
GGTCCGAAATCAGCTTTAGCTATTTTAGCGACAAGTACGCCTAATGAAGTAAAACGTGCCATTGAAAATGAAAATGATAC
GTATTTAACTAAATTCCCAGGAATTGGTAAGAAAACGGCAAGACAGATTGTCTTAGATTTAAAAGGTAAAGTGAAAATTA
CTGAAGAAGATAGCGATTCATTATTACAAGTAGACGCTACTTCGACGGTGCAAGATCAATTCGTGCAAGAAGCAATGTTA
GCGTTAGAAGCATTAGGTTATTCTAAACGAGAGCTTGCAAAAGTTGAGAAAACGTTAAATAAAAATAAATATGACTCAGT
TGATGAAGCTGTTAAGGCAGGTCTTCAATTAGTTGTATCTTAA

Domains

Predicted by InterProScan.

• Helix-hairpin-helix domain (HHH_5) (71-128)

• RuvA, C-terminal domain (RuvA_C) (156-197)

• RuvA N terminal domain (RuvA_N) (1-61)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ruvA	Streptococcus pneumoniae TIGR4	45.729	99.5	0.455
ruvA	Streptococcus pneumoniae R6	45.226	99.5	0.45
ruvA	Streptococcus pneumoniae D39	45.226	99.5	0.45
ruvA	Bacillus subtilis subsp. subtilis str. 168	42.211	99.5	0.42