Detailed information NTG0767641

Bioinformatically predicted

Overview

• Name: pilU
• Type: Machinery gene
• Locus tag: O6P33_RS03715
• Genome accession: NZ_CP114976
• Coordinates: 762551..763696 (+)
• Length: 381 a.a.
• NCBI ID: WP_269818904.1
• Uniprot ID: A0AAF0AJG0
• Organism: Denitrificimonas caeni strain CE14
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 757551..768696

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
O6P33_RS03690 (O6P33_03690)	metX	758040..759179 (-)	1140	WP_269818898.1	homoserine O-succinyltransferase MetX	-
O6P33_RS03695 (O6P33_03695)	-	759430..759732 (-)	303	WP_269818899.1	DUF167 family protein	-
O6P33_RS03700 (O6P33_03700)	-	759729..760334 (-)	606	WP_269818901.1	YggT family protein	-
O6P33_RS03705 (O6P33_03705)	proC	760344..761162 (-)	819	WP_269818902.1	pyrroline-5-carboxylate reductase	-
O6P33_RS03710 (O6P33_03710)	pilT	761477..762511 (+)	1035	WP_269818903.1	type IV pilus twitching motility protein PilT	Machinery gene
O6P33_RS03715 (O6P33_03715)	pilU	762551..763696 (+)	1146	WP_269818904.1	PilT/PilU family type 4a pilus ATPase	Machinery gene
O6P33_RS03720 (O6P33_03720)	-	763717..764409 (+)	693	WP_269818905.1	cytochrome b/b6 domain-containing protein	-
O6P33_RS03725 (O6P33_03725)	-	764494..764961 (-)	468	WP_269818906.1	c-type cytochrome	-
O6P33_RS03730 (O6P33_03730)	-	765502..766599 (+)	1098	WP_420094959.1	polyamine ABC transporter substrate-binding protein	-
O6P33_RS03735 (O6P33_03735)	-	766716..767801 (+)	1086	WP_420094977.1	polyamine ABC transporter substrate-binding protein	-

Sequence

Protein

• Length: 381 a.a.
• Molecular weight: 42299.76 Da
• Isoelectric Point: 7.0673

>NTDB_id=767641 O6P33_RS03715 WP_269818904.1 762551..763696(+) (pilU) [Denitrificimonas caeni strain CE14]
MEFEKLLRLMVEKGGSDLFITTGVAPSMKINGRIMPVTKSPLSPEMAREMVLGTMNEQQRRDFAKHFECNFAISARGIGR
FRVSAFYQRNLVGMVLRRIETNIPSLDDLKLPDVLKQLAMTKRGLVLFVGATGTGKSTSLAAMVGHRNKNSSGHIISIED
PIEFLHQHQNCIVTQREVGIDTESFEVALKNTLRQAPDVILIGEVRTRETMDYAVTFAETGHLCLATLHANNANQALDRI
INFFPSDRQQQVWMDLSLNLRAIVAQQLVPTPDGKGRRAVIEVLINTPLAADLIRKGAVHELKPLMKRSTELGMQTFDQA
LYALYSQGEITYEDALAHADSANDLRLMIKLGSEVAGDHLTTMPSGLSLEIADENPGQHLR

Nucleotide

• Length: 1146 bp

>NTDB_id=767641 O6P33_RS03715 WP_269818904.1 762551..763696(+) (pilU) [Denitrificimonas caeni strain CE14]
ATGGAATTTGAAAAGCTTTTACGCTTAATGGTGGAGAAGGGGGGCTCTGACCTCTTTATTACCACCGGTGTGGCGCCATC
AATGAAAATTAACGGCAGAATTATGCCGGTTACCAAGAGCCCACTGTCCCCAGAAATGGCTCGGGAAATGGTGTTAGGAA
CGATGAACGAGCAGCAGCGTCGTGACTTTGCTAAACATTTCGAGTGCAATTTCGCCATCAGTGCCCGAGGCATTGGGCGC
TTTCGGGTCAGTGCGTTCTATCAGCGCAACCTGGTGGGGATGGTGTTGCGCCGTATTGAAACCAATATTCCGAGCCTCGA
TGACTTGAAGCTACCCGATGTACTTAAACAGTTGGCCATGACCAAGCGTGGTTTGGTGTTGTTTGTTGGTGCCACAGGTA
CTGGTAAATCCACCTCGCTCGCGGCAATGGTGGGCCACCGCAATAAAAACAGCAGTGGGCATATTATTTCCATTGAAGAC
CCCATTGAGTTCTTGCATCAGCATCAAAACTGCATCGTCACCCAGCGTGAAGTAGGGATTGATACCGAATCTTTTGAAGT
GGCGTTGAAAAATACCTTGCGCCAAGCGCCGGATGTGATTTTAATCGGTGAGGTGCGTACCCGCGAAACCATGGATTACG
CCGTAACATTTGCGGAGACAGGGCATCTGTGTTTGGCAACCTTGCACGCCAACAACGCCAACCAAGCCTTAGACCGCATT
ATTAACTTTTTCCCATCGGACCGTCAGCAGCAAGTATGGATGGATTTATCGCTTAACCTGCGTGCCATTGTTGCCCAGCA
GTTGGTACCCACCCCCGACGGTAAAGGTCGCCGGGCGGTGATTGAGGTGTTGATTAATACACCTTTGGCTGCTGATCTGA
TTCGCAAGGGTGCGGTGCATGAGTTAAAGCCGTTAATGAAGCGCTCCACTGAGCTGGGGATGCAAACCTTTGACCAAGCG
TTGTATGCGTTGTATTCACAAGGTGAAATCACCTATGAAGATGCTTTGGCACATGCTGACTCGGCTAACGACTTACGCTT
AATGATTAAGCTGGGCTCGGAAGTGGCCGGTGATCATTTGACCACTATGCCTTCAGGGTTATCGCTAGAAATTGCCGATG
AAAATCCCGGTCAGCATCTGCGCTAA

Domains

Predicted by InterproScan.

• Type II/IV secretion system protein (T2SSE) (113-270)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilU	Pseudomonas stutzeri DSM 10701	85.827	100	0.858
pilU	Acinetobacter baylyi ADP1	64.789	93.176	0.604
pilU	Vibrio cholerae strain A1552	57.714	91.864	0.53
pilT	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	42.773	88.976	0.381