Detailed information NTG0767638

Bioinformatically predicted

Overview

• Name: pilM
• Type: Machinery gene
• Locus tag: O6P33_RS03355
• Genome accession: NZ_CP114976
• Coordinates: 700013..701077 (+)
• Length: 354 a.a.
• NCBI ID: WP_269818836.1
• Uniprot ID: -
• Organism: Denitrificimonas caeni strain CE14
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 695013..706077

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
O6P33_RS03340 (O6P33_03340)	-	695060..695863 (+)	804	WP_269818833.1	thermonuclease family protein	-
O6P33_RS03345 (O6P33_03345)	-	696023..697291 (+)	1269	WP_269818834.1	malic enzyme-like NAD(P)-binding protein	-
O6P33_RS03350 (O6P33_03350)	-	697422..699830 (-)	2409	WP_269818835.1	penicillin-binding protein 1A	-
O6P33_RS03355 (O6P33_03355)	pilM	700013..701077 (+)	1065	WP_269818836.1	pilus assembly protein PilM	Machinery gene
O6P33_RS03360 (O6P33_03360)	-	701077..701652 (+)	576	WP_269818837.1	PilN domain-containing protein	-
O6P33_RS03365 (O6P33_03365)	-	701649..702272 (+)	624	WP_269818838.1	type 4a pilus biogenesis protein PilO	-
O6P33_RS03370 (O6P33_03370)	-	702269..702796 (+)	528	WP_269818839.1	pilus assembly protein PilP	-
O6P33_RS03375 (O6P33_03375)	pilQ	702848..704857 (+)	2010	WP_269818840.1	type IV pilus secretin PilQ family protein	Machinery gene
O6P33_RS03380 (O6P33_03380)	aroK	704857..705381 (+)	525	WP_269818841.1	shikimate kinase AroK	-

Sequence

Protein

• Length: 354 a.a.
• Molecular weight: 38013.52 Da
• Isoelectric Point: 4.4100

>NTDB_id=767638 O6P33_RS03355 WP_269818836.1 700013..701077(+) (pilM) [Denitrificimonas caeni strain CE14]
MLGLFKKKANTLLGIDISSTSVKLIELSRSGSRYKVEAYAVEPLPPNAIVEKNIAELEMVGQVISRLVTKARTGVKQVAV
AVAGSAVITKTIEMDAGLSDDELENQLKIEADQYIPYPLEEVAIDFEVQGPAARSSDRVNVLLAACRKENVEVREAALGL
AGLTAKVVEIEAYALERAYSLLAEQLGDGEEELTVAVVDIGATMMTLSVLHNGQTIYTREQMFGGKQLTEEIQRRYGLTV
EEAGLAKKQGGLPDDYETEVLNPFKDAVVQQVSRSLQFFFAAGQYSDVDYIVLAGGTSSIIGLDQLVQQKIGTPTLVANP
FANMTLSSKVSAGALASDAPSLMIACGLAMRSFD

Nucleotide

• Length: 1065 bp

>NTDB_id=767638 O6P33_RS03355 WP_269818836.1 700013..701077(+) (pilM) [Denitrificimonas caeni strain CE14]
GTGCTAGGGTTATTCAAAAAGAAAGCGAATACGCTACTGGGGATCGATATAAGTTCGACTTCAGTCAAACTCATAGAGCT
GAGCCGCTCAGGTAGCCGCTATAAAGTAGAGGCGTATGCTGTTGAGCCGCTCCCACCTAATGCAATTGTGGAAAAAAATA
TTGCTGAACTGGAAATGGTCGGGCAAGTCATTTCCCGTCTGGTAACCAAAGCGCGCACAGGAGTTAAACAGGTTGCTGTT
GCTGTTGCGGGCTCTGCGGTTATTACAAAGACCATTGAAATGGATGCTGGGCTGTCTGACGATGAGTTGGAAAACCAGTT
GAAAATAGAGGCAGACCAATACATTCCATACCCGCTAGAAGAAGTCGCAATTGACTTTGAGGTGCAGGGGCCTGCTGCGC
GTAGCAGTGATCGGGTGAATGTTTTACTGGCTGCTTGCCGTAAAGAAAACGTTGAGGTGCGTGAGGCTGCTTTGGGTTTG
GCTGGGTTGACTGCCAAGGTTGTGGAGATTGAGGCTTACGCACTGGAGCGGGCATATAGTTTGCTGGCTGAGCAATTGGG
CGACGGTGAAGAAGAGCTCACTGTTGCTGTGGTCGATATTGGCGCAACTATGATGACCCTTAGCGTTTTGCACAATGGCC
AAACGATCTATACCCGTGAGCAAATGTTTGGTGGCAAGCAGTTGACTGAAGAGATTCAGCGGCGCTATGGCTTGACTGTT
GAAGAGGCGGGTTTGGCTAAAAAGCAAGGTGGCTTGCCAGATGACTATGAGACTGAAGTATTGAACCCATTTAAGGATGC
GGTGGTTCAGCAGGTATCACGTTCTTTACAGTTCTTTTTTGCTGCGGGACAGTACAGCGACGTTGACTATATCGTCTTGG
CTGGTGGTACTTCTTCTATTATTGGCCTTGACCAACTGGTGCAGCAGAAAATTGGTACGCCAACTCTAGTGGCTAACCCA
TTTGCGAATATGACGTTAAGCAGTAAAGTCAGCGCAGGGGCACTGGCAAGTGATGCTCCGTCGTTGATGATTGCTTGTGG
TTTAGCAATGAGGAGTTTTGACTGA

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (14-353)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilM	Acinetobacter baumannii D1279779	54.802	100	0.548
comM	Acinetobacter nosocomialis M2	54.802	100	0.548
comM	Acinetobacter baylyi ADP1	51.13	100	0.511
pilM	Legionella pneumophila strain ERS1305867	45.48	100	0.455