Detailed information NTG0767377

Bioinformatically predicted

Overview

• Name: pilU
• Type: Machinery gene
• Locus tag: O2T12_RS24060
• Genome accession: NZ_CP114886
• Coordinates: 5790246..5791358 (+)
• Length: 370 a.a.
• NCBI ID: WP_269671773.1
• Uniprot ID: -
• Organism: Endozoicomonas sp. GU-1 strain Ap1-3
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 5785246..5796358

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
O2T12_RS24025 (O2T12_24025)	-	5785353..5785721 (+)	369	WP_269676630.1	glutaredoxin	-
O2T12_RS25775	-	5785714..5786541 (+)	828	WP_347710300.1	DEAD/DEAH box helicase family protein	-
O2T12_RS25780	-	5786520..5787524 (+)	1005	WP_347710301.1	helicase-related protein	-
O2T12_RS24035 (O2T12_24035)	-	5787524..5788036 (+)	513	WP_269676631.1	hypothetical protein	-
O2T12_RS24040 (O2T12_24040)	-	5788096..5788446 (+)	351	WP_269671770.1	hypothetical protein	-
O2T12_RS24045 (O2T12_24045)	-	5788392..5789135 (-)	744	WP_269676632.1	type 1 glutamine amidotransferase	-
O2T12_RS24050 (O2T12_24050)	-	5789524..5789772 (+)	249	WP_269676633.1	hypothetical protein	-
O2T12_RS24055 (O2T12_24055)	-	5789714..5790199 (+)	486	WP_269671772.1	glutathione peroxidase	-
O2T12_RS24060 (O2T12_24060)	pilU	5790246..5791358 (+)	1113	WP_269671773.1	PilT/PilU family type 4a pilus ATPase	Machinery gene
O2T12_RS24065 (O2T12_24065)	-	5791411..5791899 (-)	489	WP_269671774.1	GNAT family N-acetyltransferase	-
O2T12_RS24070 (O2T12_24070)	-	5792079..5792516 (+)	438	WP_269671775.1	hypothetical protein	-

Sequence

Protein

• Length: 370 a.a.
• Molecular weight: 41157.81 Da
• Isoelectric Point: 6.0655

>NTDB_id=767377 O2T12_RS24060 WP_269671773.1 5790246..5791358(+) (pilU) [Endozoicomonas sp. GU-1 strain Ap1-3]
MDINKALSLLADRNGSELFLTVGYPPCLKINDQLVPIANTSLTSEQAHHSFATMMGEERFKEFCATRESNYAIQNPESGR
FRISAFFQRGEPGMVIRRIHHHIPSPRELGLPDIFCDLMLQERGLILITGPAGAGKTTAMASLVNHRNTAGKGHIITIED
PVEFIHSHRQCIVTQREVGLDTQSYEEGLSNALRQAPDLVVIGEIRTPEVMKHTIEFVQTGHLCIATLHANTAYQALERI
IHFFPREQHEEVLLDLSLSLQGILGQQLLSSEDGTAAYPSHEILLNTPALADLIKKGKVDEIHDLMERSKDSGMQTIDQS
IFKLFEAGKITAQQAIQHADSSNNMRLLIKMHGHQEGDDNSLPHLTISTD

Nucleotide

• Length: 1113 bp

>NTDB_id=767377 O2T12_RS24060 WP_269671773.1 5790246..5791358(+) (pilU) [Endozoicomonas sp. GU-1 strain Ap1-3]
GTGGATATTAACAAAGCACTCTCCCTGCTGGCTGATCGTAACGGTTCAGAACTGTTTCTGACGGTCGGCTACCCCCCCTG
TTTGAAAATCAATGATCAATTGGTACCGATAGCCAACACCTCGCTGACCAGCGAGCAGGCCCACCATAGTTTTGCAACCA
TGATGGGCGAAGAGCGCTTTAAAGAATTCTGTGCGACCCGTGAAAGCAATTACGCGATACAGAACCCGGAGTCCGGTCGT
TTTCGCATCAGTGCGTTCTTCCAAAGAGGGGAACCCGGAATGGTGATCCGGCGCATTCACCACCATATTCCTTCCCCCCG
GGAGCTTGGCCTGCCGGATATTTTCTGCGACCTGATGCTTCAGGAAAGAGGTTTGATCCTGATTACCGGGCCAGCAGGTG
CCGGTAAAACAACCGCGATGGCATCCCTGGTGAACCATCGCAACACTGCGGGTAAAGGGCATATCATCACCATTGAAGAC
CCTGTTGAATTTATCCACAGCCACAGACAATGCATCGTCACCCAGCGAGAAGTTGGACTGGACACCCAATCTTATGAAGA
AGGTCTGTCGAACGCCCTGCGTCAGGCACCCGACCTGGTGGTGATTGGTGAGATCCGCACCCCCGAGGTGATGAAACATA
CCATTGAATTTGTGCAAACGGGTCACCTCTGTATTGCAACCCTGCATGCCAACACAGCCTATCAGGCGCTGGAACGCATC
ATTCACTTCTTCCCCCGGGAGCAACATGAAGAGGTTCTTCTGGATTTATCACTGAGCTTGCAGGGAATCCTGGGGCAACA
GCTGCTCAGCTCTGAAGATGGTACGGCCGCCTATCCTTCCCATGAAATCCTGTTAAATACACCGGCGCTGGCCGATCTCA
TCAAAAAGGGCAAAGTGGATGAAATCCATGACTTGATGGAGCGCTCCAAAGACTCGGGTATGCAAACCATTGACCAATCC
ATATTCAAGCTGTTTGAGGCTGGAAAAATCACCGCTCAACAAGCTATCCAGCATGCTGACTCCTCCAATAACATGCGCCT
GCTCATAAAGATGCATGGTCATCAGGAAGGGGACGATAATTCCCTGCCACACTTGACCATTTCCACGGATTGA

Domains

Predicted by InterproScan.

• Type II/IV secretion system protein (T2SSE) (117-243)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilU	Pseudomonas stutzeri DSM 10701	48.907	98.919	0.484
pilU	Acinetobacter baylyi ADP1	49.716	95.135	0.473
pilU	Vibrio cholerae strain A1552	47.911	97.027	0.465