Detailed information    

insolico Bioinformatically predicted

Overview


Name   dprA   Type   Machinery gene
Locus tag   O4M77_RS13650 Genome accession   NZ_CP114606
Coordinates   2873315..2874454 (+) Length   379 a.a.
NCBI ID   WP_323713581.1    Uniprot ID   A0AAU0NGK2
Organism   Acinetobacter sp. YWS30-1     
Function   ssDNA binding; loading RecA onto ssDNA (predicted from homology)   
DNA processing

Genomic Context


Location: 2868315..2879454
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  O4M77_RS13630 (O4M77_13620) - 2868790..2870877 (-) 2088 WP_323713580.1 TonB-dependent copper receptor -
  O4M77_RS13635 (O4M77_13625) - 2870949..2871359 (-) 411 WP_005233427.1 DUF2946 family protein -
  O4M77_RS13640 (O4M77_13630) def 2871452..2871982 (-) 531 WP_004780730.1 peptide deformylase -
  O4M77_RS13645 (O4M77_13635) tsaP 2872103..2873257 (+) 1155 WP_104426934.1 LysM peptidoglycan-binding domain-containing protein Machinery gene
  O4M77_RS13650 (O4M77_13640) dprA 2873315..2874454 (+) 1140 WP_323713581.1 DNA-processing protein DprA Machinery gene
  O4M77_RS13655 (O4M77_13645) - 2874495..2875064 (+) 570 WP_034171542.1 L-threonylcarbamoyladenylate synthase -
  O4M77_RS13660 (O4M77_13650) - 2875461..2876372 (-) 912 WP_313660608.1 DMT family transporter -
  O4M77_RS13665 (O4M77_13655) - 2876564..2877109 (+) 546 WP_323713582.1 glutathione peroxidase -
  O4M77_RS13670 (O4M77_13660) - 2877519..2878094 (+) 576 WP_179992710.1 hypothetical protein -
  O4M77_RS13675 (O4M77_13665) adhP 2878171..2879202 (-) 1032 WP_179992711.1 alcohol dehydrogenase AdhP -

Sequence


Protein


Download         Length: 379 a.a.        Molecular weight: 42725.57 Da        Isoelectric Point: 6.8113

>NTDB_id=766858 O4M77_RS13650 WP_323713581.1 2873315..2874454(+) (dprA) [Acinetobacter sp. YWS30-1]
MLNSLSRVQLETLTLWYLVQHSLSSFYKISQHYSSLTTAIQPDQVPTWQALGIHANHVQRLKDFSLPESQQKFQRCLEKI
QRDSDFILLYHDLHYPQQLSHYVDKPPIIFGQGQPDTLLQAQIAVVGSRKPSPHGRQVAYDFSFYLSEQGFYINSGLAQG
IDEAAHRAGLKHQGTIAVMGTGLDQTYPSQHAQLRQEIIAHGGAVITEFLPETPPLQHHFPRRNRIVSGLSLGVIVAEAT
LKSGSLITAKLAAEQGKTVFAIPGHIYSEYHKGCHQLIREGAILIDHPQQVIEELALATQWQALQNEVQHDMADELPAHI
PPHLLRLYNQLDWVGQDLDHLSHHLQQDVSSLTGQLMELELLGFCTQQAGMYLRCRPHK

Nucleotide


Download         Length: 1140 bp        

>NTDB_id=766858 O4M77_RS13650 WP_323713581.1 2873315..2874454(+) (dprA) [Acinetobacter sp. YWS30-1]
ATGCTGAACTCGTTATCACGCGTGCAACTGGAAACACTGACGTTATGGTATCTGGTTCAGCATTCTCTTTCGAGCTTCTA
TAAAATCAGTCAGCATTATTCAAGTCTGACCACAGCCATACAGCCTGATCAGGTGCCTACCTGGCAGGCGCTTGGCATTC
ATGCCAATCATGTCCAACGCTTAAAAGACTTCTCGCTTCCAGAATCACAGCAGAAATTTCAGCGCTGTCTGGAAAAAATT
CAACGAGATAGTGATTTCATCCTGCTCTATCATGATCTGCACTATCCGCAGCAACTCAGCCACTATGTAGACAAACCACC
AATTATTTTTGGTCAAGGTCAGCCGGATACATTGCTTCAGGCTCAAATTGCGGTTGTAGGAAGTCGCAAGCCGAGTCCTC
ACGGCCGGCAAGTAGCTTATGATTTCTCCTTTTATTTGAGTGAACAGGGTTTCTATATTAATAGTGGATTAGCACAAGGC
ATAGATGAAGCTGCTCATCGGGCAGGATTAAAACATCAGGGAACCATTGCGGTGATGGGAACCGGACTGGATCAAACCTA
CCCTTCTCAACATGCACAATTGCGCCAGGAAATCATTGCACATGGTGGTGCGGTCATTACCGAGTTTCTGCCAGAGACTC
CACCGTTGCAGCATCACTTTCCACGGCGTAACCGGATTGTCAGTGGCTTAAGTCTCGGGGTCATTGTGGCTGAAGCGACC
TTAAAAAGCGGCTCTCTAATTACGGCCAAACTGGCTGCCGAACAAGGCAAAACCGTATTTGCTATTCCGGGGCATATTTA
TAGCGAATATCATAAGGGCTGCCATCAGCTGATTCGTGAAGGCGCGATTCTGATTGATCACCCACAACAGGTGATTGAAG
AACTGGCTCTGGCGACCCAATGGCAAGCCTTACAAAATGAAGTACAACATGACATGGCGGATGAACTTCCTGCACACATA
CCGCCCCATCTGCTCAGACTTTATAACCAGTTAGACTGGGTCGGACAGGATCTGGATCATCTCAGTCATCATCTGCAACA
GGATGTTTCTTCTCTCACCGGTCAATTGATGGAACTGGAGCTACTTGGCTTTTGCACCCAGCAAGCCGGCATGTATCTAC
GTTGTCGTCCGCATAAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dprA Acinetobacter baumannii strain A118

63.298

99.208

0.628

  dprA Acinetobacter baumannii D1279779

62.5

99.208

0.62

  dprA Acinetobacter baylyi ADP1

60

100

0.602

  dprA Vibrio cholerae strain A1552

40.828

89.182

0.364