Detailed information
Bioinformatically predicted
Overview
| Name | comA/nlmT | Type | Regulator |
| Locus tag | QIH85_RS06495 | Genome accession | NZ_CP126010 |
| Coordinates | 1404068..1404211 (+) | Length | 47 a.a. |
| NCBI ID | WP_158332945.1 | Uniprot ID | - |
| Organism | Bradyrhizobium japonicum strain N03G-Bj | ||
| Function | transport of ComC (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1399068..1409211
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QIH85_RS06475 (QIH85_06475) | rpmE | 1399572..1399799 (-) | 228 | WP_008137002.1 | 50S ribosomal protein L31 | - |
| QIH85_RS06480 (QIH85_06480) | - | 1400000..1401844 (+) | 1845 | WP_038933463.1 | ABC transporter ATP-binding protein/permease | - |
| QIH85_RS06485 (QIH85_06485) | - | 1402180..1402965 (+) | 786 | WP_148312428.1 | trypsin-like peptidase domain-containing protein | - |
| QIH85_RS06490 (QIH85_06490) | - | 1403059..1403940 (+) | 882 | WP_039156279.1 | hypothetical protein | - |
| QIH85_RS06495 (QIH85_06495) | comA/nlmT | 1404068..1404211 (+) | 144 | WP_158332945.1 | hypothetical protein | Regulator |
| QIH85_RS06500 (QIH85_06500) | - | 1404325..1405389 (-) | 1065 | WP_026192128.1 | IS630-like element ISRj1 family transposase | - |
| QIH85_RS06505 (QIH85_06505) | - | 1405557..1406003 (-) | 447 | WP_039156282.1 | GNAT family N-acetyltransferase | - |
| QIH85_RS06510 (QIH85_06510) | - | 1406003..1407031 (-) | 1029 | WP_039156285.1 | peptidoglycan -binding protein | - |
| QIH85_RS06515 (QIH85_06515) | - | 1407186..1408211 (-) | 1026 | WP_039156287.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 47 a.a. Molecular weight: 5152.00 Da Isoelectric Point: 7.1631
>NTDB_id=766220 QIH85_RS06495 WP_158332945.1 1404068..1404211(+) (comA/nlmT) [Bradyrhizobium japonicum strain N03G-Bj]
MIAHRPATVLSCDRILVMDQGKIVEQGTHAELVAKNGLYARLQFEGA
MIAHRPATVLSCDRILVMDQGKIVEQGTHAELVAKNGLYARLQFEGA
Nucleotide
Download Length: 144 bp
>NTDB_id=766220 QIH85_RS06495 WP_158332945.1 1404068..1404211(+) (comA/nlmT) [Bradyrhizobium japonicum strain N03G-Bj]
GTGATCGCGCACCGGCCCGCCACCGTGCTGTCCTGCGACCGCATCCTGGTGATGGACCAGGGCAAGATCGTCGAGCAGGG
CACGCACGCCGAGCTCGTCGCCAAGAACGGGCTCTATGCGAGGCTGCAGTTCGAGGGCGCGTGA
GTGATCGCGCACCGGCCCGCCACCGTGCTGTCCTGCGACCGCATCCTGGTGATGGACCAGGGCAAGATCGTCGAGCAGGG
CACGCACGCCGAGCTCGTCGCCAAGAACGGGCTCTATGCGAGGCTGCAGTTCGAGGGCGCGTGA
Domains
No domain identified.
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comA/nlmT | Streptococcus mutans UA159 |
58.537 |
87.234 |
0.511 |
| rcrQ | Streptococcus mutans UA159 |
54.762 |
89.362 |
0.489 |
| comA | Streptococcus pneumoniae TIGR4 |
51.22 |
87.234 |
0.447 |
| comA | Streptococcus pneumoniae Rx1 |
51.22 |
87.234 |
0.447 |
| comA | Streptococcus mitis NCTC 12261 |
51.22 |
87.234 |
0.447 |
| comA | Streptococcus pneumoniae D39 |
51.22 |
87.234 |
0.447 |
| comA | Streptococcus pneumoniae R6 |
51.22 |
87.234 |
0.447 |
| rcrP | Streptococcus mutans UA159 |
47.727 |
93.617 |
0.447 |
| comA | Streptococcus mitis SK321 |
48.78 |
87.234 |
0.426 |
| comA | Streptococcus gordonii str. Challis substr. CH1 |
43.902 |
87.234 |
0.383 |