Detailed information    

insolico Bioinformatically predicted

Overview


Name   dprA   Type   Machinery gene
Locus tag   O1449_RS00735 Genome accession   NZ_CP114264
Coordinates   145473..146603 (-) Length   376 a.a.
NCBI ID   WP_269238881.1    Uniprot ID   A0A9E9L557
Organism   Acinetobacter sp. TR3     
Function   ssDNA binding; loading RecA onto ssDNA (predicted from homology)   
DNA processing

Genomic Context


Location: 140473..151603
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  O1449_RS00705 (O1449_00705) - 140548..140760 (+) 213 WP_331276183.1 transposase -
  O1449_RS00710 (O1449_00710) - 141043..141738 (-) 696 WP_269229100.1 phospholipase D family protein -
  O1449_RS00715 (O1449_00715) - 141843..142388 (-) 546 WP_269238875.1 glutathione peroxidase -
  O1449_RS00720 (O1449_00720) - 142507..143280 (-) 774 WP_269238876.1 helix-turn-helix transcriptional regulator -
  O1449_RS00725 (O1449_00725) - 143559..144479 (+) 921 WP_269238877.1 DMT family transporter -
  O1449_RS00730 (O1449_00730) - 144871..145440 (-) 570 WP_269238878.1 Sua5/YciO/YrdC/YwlC family protein -
  O1449_RS00735 (O1449_00735) dprA 145473..146603 (-) 1131 WP_269238881.1 DNA-processing protein DprA Machinery gene
  O1449_RS00740 (O1449_00740) tsaP 146617..147768 (-) 1152 WP_269238882.1 LysM peptidoglycan-binding domain-containing protein Machinery gene
  O1449_RS00745 (O1449_00745) def 147889..148419 (+) 531 WP_269238883.1 peptide deformylase -
  O1449_RS00750 (O1449_00750) - 148443..148880 (+) 438 WP_269229092.1 DUF2946 family protein -
  O1449_RS00755 (O1449_00755) - 148954..151053 (+) 2100 WP_269238885.1 TonB-dependent copper receptor -

Sequence


Protein


Download         Length: 376 a.a.        Molecular weight: 42308.14 Da        Isoelectric Point: 6.7369

>NTDB_id=765279 O1449_RS00735 WP_269238881.1 145473..146603(-) (dprA) [Acinetobacter sp. TR3]
MLNQLSPHHYHTVLVWYLVQHSLSSFQKIRNYFGSCTEAVQTHRLSEWQQLGLHKNHLKRLEEFQTPHGKQQFDHMVQLI
CQHTDFILTPEDIDYPTQLLPYSDHPPILFGQGQAQALLQPQISMVGSRKPSPHGRQVAYDFAYYLSEKGFYISSGLAHG
IDEAAHRGGLAHHRTIAVTGTGLDTVYPSQNIKLAQQITQSGAIVTEFLPTTMPLQQHFPRRNRIVSGLSLGVVVVEAAL
KSGSLITANEAANQGKMVFAIPGHIYSEHHQGCHQLIREGATLVDHPEQVIEDLALPTQWQVQQQISEEPVTITPSLPTH
LIALYQSLDWVGQDLDELSQRHPIPIAELTAQLMELELLGFCIQQGGRYLRCRPIH

Nucleotide


Download         Length: 1131 bp        

>NTDB_id=765279 O1449_RS00735 WP_269238881.1 145473..146603(-) (dprA) [Acinetobacter sp. TR3]
ATGTTGAATCAGCTATCGCCCCATCATTATCATACTGTGTTGGTGTGGTACTTGGTTCAACACTCCCTTTCTAGTTTTCA
AAAAATTCGAAACTATTTCGGTAGTTGTACGGAAGCAGTCCAAACACATCGCCTTTCTGAATGGCAACAGCTCGGTTTAC
ACAAAAATCATTTAAAACGTCTAGAAGAATTCCAAACCCCACATGGGAAACAGCAATTTGACCACATGGTTCAATTGATT
TGTCAGCATACTGATTTTATTTTAACCCCTGAAGATATCGACTACCCTACTCAACTTTTACCTTATTCAGATCATCCTCC
AATTTTATTTGGTCAAGGTCAAGCTCAAGCATTATTACAACCCCAAATTTCCATGGTTGGCAGTCGTAAACCGAGTCCTC
ACGGGAGACAGGTTGCCTATGATTTTGCTTATTATTTAAGTGAAAAAGGATTTTACATCAGCAGTGGTTTAGCGCATGGA
ATTGATGAAGCAGCCCATCGTGGTGGCTTAGCCCATCATCGAACAATCGCTGTGACAGGAACAGGCTTAGATACAGTTTA
TCCTTCGCAGAACATCAAACTTGCACAACAGATTACTCAATCAGGTGCGATTGTCACCGAGTTTCTCCCGACGACAATGC
CTTTGCAACAGCATTTTCCACGTCGTAATCGTATTGTTAGTGGTTTAAGTCTTGGTGTGGTGGTTGTAGAAGCGGCATTA
AAGAGTGGCTCACTCATAACTGCAAATGAGGCAGCAAATCAAGGAAAAATGGTATTTGCTATTCCAGGGCACATTTATAG
TGAGCATCATCAAGGCTGTCATCAATTAATTCGTGAAGGTGCAACCTTGGTCGATCATCCTGAACAAGTCATTGAAGACT
TAGCTTTACCTACACAATGGCAAGTACAACAACAAATTTCCGAAGAACCTGTAACCATCACGCCAAGCTTACCAACACAT
TTGATTGCTCTTTATCAAAGTCTTGACTGGGTTGGACAAGACTTGGATGAACTTTCTCAACGTCATCCAATTCCGATTGC
AGAACTCACAGCCCAATTAATGGAATTAGAATTACTCGGTTTCTGTATACAACAGGGCGGTCGCTATTTACGTTGTCGTC
CAATTCATTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dprA Acinetobacter baumannii D1279779

74.133

99.734

0.739

  dprA Acinetobacter baumannii strain A118

73.867

99.734

0.737

  dprA Acinetobacter baylyi ADP1

70

100

0.707

  dprA Vibrio cholerae strain A1552

41.246

89.628

0.37