Detailed information    

insolico Bioinformatically predicted

Overview


Name   dprA   Type   Machinery gene
Locus tag   O1450_RS15265 Genome accession   NZ_CP114256
Coordinates   3153431..3154561 (+) Length   376 a.a.
NCBI ID   WP_269229095.1    Uniprot ID   -
Organism   Acinetobacter sp. TR11     
Function   ssDNA binding; loading RecA onto ssDNA (predicted from homology)   
DNA processing

Genomic Context


Location: 3148431..3159561
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  O1450_RS15245 (O1450_15245) - 3148969..3151080 (-) 2112 WP_269229091.1 TonB-dependent copper receptor -
  O1450_RS15250 (O1450_15250) - 3151154..3151591 (-) 438 WP_269229092.1 DUF2946 family protein -
  O1450_RS15255 (O1450_15255) def 3151615..3152145 (-) 531 WP_269229093.1 peptide deformylase -
  O1450_RS15260 (O1450_15260) tsaP 3152266..3153417 (+) 1152 WP_269229094.1 LysM peptidoglycan-binding domain-containing protein Machinery gene
  O1450_RS15265 (O1450_15265) dprA 3153431..3154561 (+) 1131 WP_269229095.1 DNA-processing protein DprA Machinery gene
  O1450_RS15270 (O1450_15270) - 3154594..3155163 (+) 570 WP_269229096.1 Sua5/YciO/YrdC/YwlC family protein -
  O1450_RS15275 (O1450_15275) - 3155555..3156475 (-) 921 WP_269229097.1 DMT family transporter -
  O1450_RS15280 (O1450_15280) - 3156754..3157527 (+) 774 WP_269229098.1 helix-turn-helix transcriptional regulator -
  O1450_RS15285 (O1450_15285) - 3157646..3158191 (+) 546 WP_269229099.1 glutathione peroxidase -
  O1450_RS15290 (O1450_15290) - 3158296..3158991 (+) 696 WP_269229100.1 phospholipase D family protein -

Sequence


Protein


Download         Length: 376 a.a.        Molecular weight: 42334.22 Da        Isoelectric Point: 6.7369

>NTDB_id=765273 O1450_RS15265 WP_269229095.1 3153431..3154561(+) (dprA) [Acinetobacter sp. TR11]
MLNQLLPHHYHTVLVWYLVQHSLSSFQKIRNYFGSCTEAVQTHRLSEWQQLGLHKNHLKRLEEFQTPHGKQQFDHMVQLI
CQHTDFILTPEDIDYPTQLLPYSDHPPILFGQGQAQALLQPQISMVGSRKPSPHGRQVAYDFAYYLSEKGFYISSGLAHG
IDEAAHRGGLAHHRTIAVTGTGLDTVYPSQNIKLAQQITQSGAIVTEFLPTTMPLQQHFPRRNRIVSGLSLGVVVVEAAL
KSGSLITANEAANQGKMVFAIPGHIYSEHHQGCHQLIREGATLVDHPEQVIEDLALPTQWQVQQQISEEPVTITPSLPTH
LIALYQSLDWVGQDLDELSQRHPIPIAELTAQLMELELLGFCIQQGGRYLRCRPIH

Nucleotide


Download         Length: 1131 bp        

>NTDB_id=765273 O1450_RS15265 WP_269229095.1 3153431..3154561(+) (dprA) [Acinetobacter sp. TR11]
ATGTTGAATCAGTTACTACCCCATCATTATCATACTGTGTTGGTGTGGTATCTGGTTCAACACTCGCTTTCTAGTTTTCA
AAAAATTCGAAACTATTTCGGTAGTTGTACGGAAGCAGTCCAAACACATCGCCTTTCTGAATGGCAACAGCTCGGTTTAC
ACAAAAATCATTTAAAACGTCTAGAAGAATTCCAAACCCCACATGGGAAACAGCAATTTGACCACATGGTTCAATTGATT
TGTCAGCATACTGATTTTATTTTAACCCCTGAAGATATCGACTACCCTACTCAACTTTTACCTTATTCAGATCATCCTCC
AATTTTATTTGGTCAAGGTCAAGCTCAAGCATTATTACAACCCCAAATTTCCATGGTTGGCAGTCGTAAACCGAGTCCTC
ACGGGAGACAGGTTGCCTATGATTTTGCTTATTATTTAAGTGAAAAAGGATTTTACATCAGCAGTGGTTTAGCGCATGGA
ATTGATGAAGCAGCCCATCGTGGTGGCTTAGCCCATCATCGAACAATCGCTGTGACAGGAACAGGCTTAGATACAGTTTA
TCCTTCGCAGAACATCAAACTTGCACAACAGATTACTCAATCAGGTGCGATTGTCACCGAGTTTCTCCCGACGACAATGC
CTTTGCAACAGCATTTTCCACGTCGTAATCGTATTGTTAGTGGTTTAAGTCTTGGTGTGGTGGTTGTAGAAGCGGCATTA
AAGAGTGGCTCACTCATAACTGCAAATGAGGCAGCAAATCAAGGAAAAATGGTATTTGCTATTCCAGGGCACATTTATAG
TGAGCATCATCAAGGCTGTCATCAATTAATTCGTGAAGGTGCAACCTTGGTCGATCATCCTGAACAAGTCATTGAAGACT
TAGCTTTACCTACACAATGGCAAGTACAACAACAAATTTCCGAAGAACCTGTAACCATCACGCCAAGCTTACCAACACAT
TTGATTGCTCTTTATCAAAGTCTTGACTGGGTTGGACAAGACTTGGATGAACTTTCTCAACGTCATCCAATTCCGATTGC
AGAACTCACAGCCCAATTAATGGAATTAGAATTACTCGGTTTCTGTATACAACAGGGCGGTCGCTATTTACGTTGTCGTC
CAATTCATTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dprA Acinetobacter baumannii D1279779

73.867

99.734

0.737

  dprA Acinetobacter baumannii strain A118

73.6

99.734

0.734

  dprA Acinetobacter baylyi ADP1

69.737

100

0.705

  dprA Vibrio cholerae strain A1552

41.246

89.628

0.37