Detailed information NTG0762691

Bioinformatically predicted

Overview

• Name: pilU
• Type: Machinery gene
• Locus tag: OU800_RS21185
• Genome accession: NZ_CP113519
• Coordinates: 4786705..4787850 (-)
• Length: 381 a.a.
• NCBI ID: WP_268179315.1
• Uniprot ID: -
• Organism: Pseudomonas sp. GOM7
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 4781705..4792850

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OU800_RS21160 (OU800_21160)	ntrC	4781852..4783285 (+)	1434	WP_268179310.1	nitrogen regulation protein NR(I)	-
OU800_RS21165 (OU800_21165)	-	4783336..4783986 (-)	651	WP_268179311.1	DUF2076 domain-containing protein	-
OU800_RS21170 (OU800_21170)	-	4784095..4784493 (-)	399	WP_268179312.1	TM2 domain-containing protein	-
OU800_RS21175 (OU800_21175)	-	4784641..4785852 (+)	1212	WP_268179313.1	putative DNA modification/repair radical SAM protein	-
OU800_RS21180 (OU800_21180)	-	4785852..4786739 (+)	888	WP_268179314.1	TIGR03915 family putative DNA repair protein	-
OU800_RS21185 (OU800_21185)	pilU	4786705..4787850 (-)	1146	WP_268179315.1	PilT/PilU family type 4a pilus ATPase	Machinery gene
OU800_RS21190 (OU800_21190)	pilT	4787977..4789011 (-)	1035	WP_268179316.1	type IV pilus twitching motility protein PilT	Machinery gene
OU800_RS21195 (OU800_21195)	-	4789077..4789769 (+)	693	WP_268179317.1	YggS family pyridoxal phosphate-dependent enzyme	-
OU800_RS21200 (OU800_21200)	proC	4789787..4790602 (+)	816	WP_268179318.1	pyrroline-5-carboxylate reductase	-
OU800_RS21205 (OU800_21205)	-	4790657..4791250 (+)	594	WP_268179319.1	YggT family protein	-
OU800_RS21210 (OU800_21210)	-	4791253..4791543 (+)	291	WP_268179320.1	DUF167 domain-containing protein	-

Sequence

Protein

• Length: 381 a.a.
• Molecular weight: 42614.91 Da
• Isoelectric Point: 6.7255

>NTDB_id=762691 OU800_RS21185 WP_268179315.1 4786705..4787850(-) (pilU) [Pseudomonas sp. GOM7]
MEFEKLLRLMVEKGGSDLFITTGVPPSMKVNGKIMPVTKNPMTPEQARETVLGVMNDAQRRDFAEHHECNFAISARGIGR
FRVSAFYQRNLVGMVLRRIETNIPTLDDLKLPEVLKKLSMTKRGLVLFVGATGTGKSTSLAAMIGYRNRNSSGHIISIED
PIEYIHQHQSCIVTQREVGIDTDSFEVALKNTLRQAPDVIMIGEVRTRETMDHAVAFAETGHLCLATLHANNANQALDRI
INFFPPDRHNQVWMDLSLNLKAIVAQQLVPTPDGKGRRAVIEVLINTPLAADLIRKGEIHELKSLMKRSTEQGMQTFDQA
LYNLYTQGEITYEDALLYADSANDLRLMIKLGSETDGDHLTSMAQGLSLEISEEDPGRRFR

Nucleotide

• Length: 1146 bp

>NTDB_id=762691 OU800_RS21185 WP_268179315.1 4786705..4787850(-) (pilU) [Pseudomonas sp. GOM7]
ATGGAATTCGAGAAGCTGCTGCGTCTGATGGTGGAAAAGGGTGGTTCGGATCTGTTCATCACCACCGGTGTGCCGCCTTC
GATGAAGGTCAATGGCAAGATCATGCCGGTGACCAAGAACCCCATGACCCCGGAGCAGGCTCGCGAAACCGTGCTGGGGG
TGATGAACGATGCCCAGCGCCGCGATTTCGCCGAGCACCACGAGTGCAACTTCGCCATCAGCGCGCGCGGCATCGGCCGC
TTCCGTGTCAGTGCCTTCTACCAGCGCAACCTGGTGGGCATGGTGCTGCGCCGCATCGAAACCAACATTCCCACCCTCGA
CGACCTCAAGCTGCCGGAAGTCCTCAAGAAACTGTCGATGACCAAGCGCGGCCTGGTGTTGTTCGTCGGTGCCACCGGCA
CGGGTAAATCCACCTCGCTGGCGGCGATGATCGGCTACCGTAACCGCAACAGCAGTGGCCATATCATTTCCATCGAGGAT
CCGATCGAGTACATCCACCAGCACCAGAGTTGCATCGTCACCCAGCGTGAGGTGGGCATCGACACCGACTCCTTCGAGGT
GGCGCTGAAGAACACCCTGCGCCAGGCGCCGGACGTCATCATGATCGGCGAGGTGCGTACCCGCGAAACCATGGATCACG
CCGTGGCCTTCGCCGAGACCGGCCACCTGTGCTTGGCCACCTTGCACGCCAACAACGCCAACCAGGCGCTGGATCGCATC
ATCAACTTCTTCCCACCGGATCGACACAACCAGGTGTGGATGGATTTGTCGCTCAACCTCAAGGCCATCGTCGCCCAGCA
ACTGGTGCCGACCCCGGACGGCAAGGGCCGTCGTGCGGTGATCGAGGTGCTGATCAACACGCCGCTGGCCGCCGACCTGA
TCCGCAAGGGCGAGATCCACGAACTCAAGAGCCTGATGAAGCGCTCCACCGAGCAGGGCATGCAGACCTTCGATCAGGCG
CTGTACAACCTCTACACCCAGGGCGAGATTACCTACGAGGACGCGCTGCTCTATGCCGACTCGGCCAACGACCTGCGCCT
GATGATCAAGCTGGGCTCGGAAACCGATGGCGACCACCTGACGAGCATGGCGCAGGGCCTGTCGCTGGAGATCAGCGAGG
AAGATCCGGGGCGTCGTTTCCGCTGA

Domains

Predicted by InterproScan.

• Type II/IV secretion system protein (T2SSE) (110-270)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilU	Pseudomonas stutzeri DSM 10701	89.501	100	0.895
pilU	Acinetobacter baylyi ADP1	63.866	93.701	0.598
pilU	Vibrio cholerae strain A1552	58	91.864	0.533
pilT	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	41.667	88.189	0.367