Detailed information
Bioinformatically predicted
Overview
| Name | comYH | Type | Machinery gene |
| Locus tag | OQG81_RS00815 | Genome accession | NZ_CP113440 |
| Coordinates | 118434..119390 (+) | Length | 318 a.a. |
| NCBI ID | WP_014293770.1 | Uniprot ID | - |
| Organism | Streptococcus macedonicus strain E37 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 113434..124390
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| OQG81_RS00775 (OQG81_00775) | - | 114352..114681 (+) | 330 | WP_014293762.1 | DUF1033 family protein | - |
| OQG81_RS00780 (OQG81_00780) | comYA | 114791..115732 (+) | 942 | WP_014293763.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| OQG81_RS00785 (OQG81_00785) | comYB | 115614..116699 (+) | 1086 | WP_014293764.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| OQG81_RS00790 (OQG81_00790) | comYC | 116699..116992 (+) | 294 | WP_039670352.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| OQG81_RS00795 (OQG81_00795) | comYD | 116976..117407 (+) | 432 | WP_014293766.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| OQG81_RS00800 (OQG81_00800) | comGE | 117361..117654 (+) | 294 | WP_044562943.1 | competence type IV pilus minor pilin ComGE | - |
| OQG81_RS00805 (OQG81_00805) | comYF | 117608..118075 (+) | 468 | WP_014293768.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| OQG81_RS00810 (OQG81_00810) | comYG | 118047..118352 (+) | 306 | WP_014293769.1 | competence type IV pilus minor pilin ComGG | Machinery gene |
| OQG81_RS00815 (OQG81_00815) | comYH | 118434..119390 (+) | 957 | WP_014293770.1 | class I SAM-dependent methyltransferase | Machinery gene |
| OQG81_RS00820 (OQG81_00820) | - | 119443..120642 (+) | 1200 | WP_265643910.1 | acetate kinase | - |
| OQG81_RS00825 (OQG81_00825) | - | 120804..121004 (+) | 201 | WP_012961332.1 | helix-turn-helix transcriptional regulator | - |
| OQG81_RS00830 (OQG81_00830) | - | 121014..121223 (+) | 210 | WP_014293772.1 | hypothetical protein | - |
| OQG81_RS00835 (OQG81_00835) | - | 121236..121688 (+) | 453 | WP_014293773.1 | hypothetical protein | - |
| OQG81_RS00840 (OQG81_00840) | - | 121700..122335 (+) | 636 | WP_014293774.1 | CPBP family intramembrane glutamic endopeptidase | - |
| OQG81_RS00845 (OQG81_00845) | comR | 122514..123413 (+) | 900 | WP_039670354.1 | helix-turn-helix domain-containing protein | Regulator |
Sequence
Protein
Download Length: 318 a.a. Molecular weight: 36058.98 Da Isoelectric Point: 4.3705
>NTDB_id=762269 OQG81_RS00815 WP_014293770.1 118434..119390(+) (comYH) [Streptococcus macedonicus strain E37]
MNFEKIETAYELILENIQLIENELKTHIYDALIEQNSFYLGAEGASEEVAANNEKLRQLALTKEEWRRAFQFIFIKAGQT
EQLQANHQFTPDAIGFILLFLIENLTDSDKIDLLEIGSGTGNLAQTLLNNSSKELNYLGIEVDDLLIDLSASIAEVLDSD
AQFIQEDAVRPQILKESDVIISDLPVGFYPNDDIAKRYKVANSDEHTYAHHLLMEQSLKYLKKDGIAVFLAPVSLLTSKQ
SDLLKQWLKDYADIIAVITLPESIFGNAANAKSIFVLKKQAAYTPETFVYPLSDLQSREALTDFIRKFQKWKIDNINF
MNFEKIETAYELILENIQLIENELKTHIYDALIEQNSFYLGAEGASEEVAANNEKLRQLALTKEEWRRAFQFIFIKAGQT
EQLQANHQFTPDAIGFILLFLIENLTDSDKIDLLEIGSGTGNLAQTLLNNSSKELNYLGIEVDDLLIDLSASIAEVLDSD
AQFIQEDAVRPQILKESDVIISDLPVGFYPNDDIAKRYKVANSDEHTYAHHLLMEQSLKYLKKDGIAVFLAPVSLLTSKQ
SDLLKQWLKDYADIIAVITLPESIFGNAANAKSIFVLKKQAAYTPETFVYPLSDLQSREALTDFIRKFQKWKIDNINF
Nucleotide
Download Length: 957 bp
>NTDB_id=762269 OQG81_RS00815 WP_014293770.1 118434..119390(+) (comYH) [Streptococcus macedonicus strain E37]
ATGAATTTTGAAAAAATTGAAACAGCCTATGAGCTGATTTTAGAAAATATCCAATTAATTGAAAATGAGTTAAAAACTCA
TATTTATGATGCGCTTATTGAACAGAATTCTTTTTACTTGGGGGCTGAAGGTGCCAGTGAAGAAGTTGCTGCCAACAATG
AAAAACTACGTCAGCTTGCATTGACCAAAGAAGAGTGGCGTCGAGCTTTCCAATTTATCTTTATTAAAGCTGGTCAAACA
GAGCAGCTGCAAGCCAATCATCAATTTACACCAGATGCTATTGGTTTTATTTTGCTGTTCTTGATTGAAAATCTGACAGA
TTCAGATAAAATTGATCTTTTAGAAATTGGTAGTGGGACAGGAAACCTTGCTCAAACATTGTTAAATAATTCGTCTAAAG
AATTAAATTATCTTGGTATTGAAGTTGACGATTTATTGATTGATTTATCAGCAAGTATTGCAGAAGTGTTGGATTCTGAT
GCTCAGTTTATTCAAGAAGATGCTGTGCGTCCACAAATTCTGAAAGAAAGTGATGTGATTATTAGTGATTTGCCAGTTGG
TTTTTATCCTAATGATGACATTGCCAAACGTTATAAAGTGGCAAATTCTGATGAGCATACTTATGCCCATCATTTATTGA
TGGAACAATCGTTAAAATATCTCAAAAAAGATGGTATTGCAGTCTTTTTGGCGCCCGTCAGTCTTTTGACAAGTAAGCAA
AGTGATTTATTGAAACAATGGTTGAAAGATTACGCGGATATTATCGCCGTGATTACCTTGCCAGAATCTATTTTTGGTAA
TGCAGCGAATGCAAAATCAATTTTTGTTTTGAAAAAACAGGCTGCGTATACGCCAGAAACCTTTGTTTATCCACTTTCTG
ACTTACAAAGTCGTGAAGCTCTGACTGATTTCATTAGAAAATTTCAAAAATGGAAAATTGATAATATTAATTTTTAA
ATGAATTTTGAAAAAATTGAAACAGCCTATGAGCTGATTTTAGAAAATATCCAATTAATTGAAAATGAGTTAAAAACTCA
TATTTATGATGCGCTTATTGAACAGAATTCTTTTTACTTGGGGGCTGAAGGTGCCAGTGAAGAAGTTGCTGCCAACAATG
AAAAACTACGTCAGCTTGCATTGACCAAAGAAGAGTGGCGTCGAGCTTTCCAATTTATCTTTATTAAAGCTGGTCAAACA
GAGCAGCTGCAAGCCAATCATCAATTTACACCAGATGCTATTGGTTTTATTTTGCTGTTCTTGATTGAAAATCTGACAGA
TTCAGATAAAATTGATCTTTTAGAAATTGGTAGTGGGACAGGAAACCTTGCTCAAACATTGTTAAATAATTCGTCTAAAG
AATTAAATTATCTTGGTATTGAAGTTGACGATTTATTGATTGATTTATCAGCAAGTATTGCAGAAGTGTTGGATTCTGAT
GCTCAGTTTATTCAAGAAGATGCTGTGCGTCCACAAATTCTGAAAGAAAGTGATGTGATTATTAGTGATTTGCCAGTTGG
TTTTTATCCTAATGATGACATTGCCAAACGTTATAAAGTGGCAAATTCTGATGAGCATACTTATGCCCATCATTTATTGA
TGGAACAATCGTTAAAATATCTCAAAAAAGATGGTATTGCAGTCTTTTTGGCGCCCGTCAGTCTTTTGACAAGTAAGCAA
AGTGATTTATTGAAACAATGGTTGAAAGATTACGCGGATATTATCGCCGTGATTACCTTGCCAGAATCTATTTTTGGTAA
TGCAGCGAATGCAAAATCAATTTTTGTTTTGAAAAAACAGGCTGCGTATACGCCAGAAACCTTTGTTTATCCACTTTCTG
ACTTACAAAGTCGTGAAGCTCTGACTGATTTCATTAGAAAATTTCAAAAATGGAAAATTGATAATATTAATTTTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comYH | Streptococcus mutans UA140 |
69.304 |
99.371 |
0.689 |
| comYH | Streptococcus mutans UA159 |
68.987 |
99.371 |
0.686 |