Detailed information    

insolico Bioinformatically predicted

Overview


Name   comYG   Type   Machinery gene
Locus tag   OQG81_RS00810 Genome accession   NZ_CP113440
Coordinates   118047..118352 (+) Length   101 a.a.
NCBI ID   WP_014293769.1    Uniprot ID   A0A2G3NZN8
Organism   Streptococcus macedonicus strain E37     
Function   dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology)   
DNA binding and uptake

Genomic Context


Location: 113047..123352
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OQG81_RS00775 (OQG81_00775) - 114352..114681 (+) 330 WP_014293762.1 DUF1033 family protein -
  OQG81_RS00780 (OQG81_00780) comYA 114791..115732 (+) 942 WP_014293763.1 competence type IV pilus ATPase ComGA Machinery gene
  OQG81_RS00785 (OQG81_00785) comYB 115614..116699 (+) 1086 WP_014293764.1 competence type IV pilus assembly protein ComGB Machinery gene
  OQG81_RS00790 (OQG81_00790) comYC 116699..116992 (+) 294 WP_039670352.1 competence type IV pilus major pilin ComGC Machinery gene
  OQG81_RS00795 (OQG81_00795) comYD 116976..117407 (+) 432 WP_014293766.1 competence type IV pilus minor pilin ComGD Machinery gene
  OQG81_RS00800 (OQG81_00800) comGE 117361..117654 (+) 294 WP_044562943.1 competence type IV pilus minor pilin ComGE -
  OQG81_RS00805 (OQG81_00805) comYF 117608..118075 (+) 468 WP_014293768.1 competence type IV pilus minor pilin ComGF Machinery gene
  OQG81_RS00810 (OQG81_00810) comYG 118047..118352 (+) 306 WP_014293769.1 competence type IV pilus minor pilin ComGG Machinery gene
  OQG81_RS00815 (OQG81_00815) comYH 118434..119390 (+) 957 WP_014293770.1 class I SAM-dependent methyltransferase Machinery gene
  OQG81_RS00820 (OQG81_00820) - 119443..120642 (+) 1200 WP_265643910.1 acetate kinase -
  OQG81_RS00825 (OQG81_00825) - 120804..121004 (+) 201 WP_012961332.1 helix-turn-helix transcriptional regulator -
  OQG81_RS00830 (OQG81_00830) - 121014..121223 (+) 210 WP_014293772.1 hypothetical protein -
  OQG81_RS00835 (OQG81_00835) - 121236..121688 (+) 453 WP_014293773.1 hypothetical protein -
  OQG81_RS00840 (OQG81_00840) - 121700..122335 (+) 636 WP_014293774.1 CPBP family intramembrane glutamic endopeptidase -

Sequence


Protein


Download         Length: 101 a.a.        Molecular weight: 11576.50 Da        Isoelectric Point: 8.4268

>NTDB_id=762268 OQG81_RS00810 WP_014293769.1 118047..118352(+) (comYG) [Streptococcus macedonicus strain E37]
MFTLLKRQVKAGILIYALLMAAIFALLLQFYLGRVVAMERQHQAQLSASQAYLMAKLTKDLAKEDTGHLTFDQGVADYNF
QDNRLQVVVKLSNQQEFDYVF

Nucleotide


Download         Length: 306 bp        

>NTDB_id=762268 OQG81_RS00810 WP_014293769.1 118047..118352(+) (comYG) [Streptococcus macedonicus strain E37]
TTGTTTACACTTTTGAAACGGCAAGTTAAGGCAGGGATTTTAATCTATGCTTTGCTTATGGCAGCAATTTTTGCCTTGCT
TTTACAATTTTATCTAGGACGTGTCGTGGCAATGGAGCGACAACATCAAGCGCAGCTATCTGCTAGTCAGGCTTATTTAA
TGGCAAAATTAACAAAAGATTTGGCAAAAGAGGATACTGGTCACCTTACATTTGATCAAGGAGTAGCTGACTACAACTTC
CAAGATAATCGATTGCAGGTGGTGGTCAAACTGTCTAATCAACAAGAATTTGACTATGTTTTCTAA

Domains



No domain identified.



Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A2G3NZN8

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comYG Streptococcus mutans UA140

56.122

97.03

0.545

  comYG Streptococcus mutans UA159

56.122

97.03

0.545

  comGG/cglG Streptococcus mitis NCTC 12261

39.583

95.05

0.376