Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   QL281_RS11515 Genome accession   NZ_CP125292
Coordinates   2138613..2139302 (-) Length   229 a.a.
NCBI ID   WP_003243527.1    Uniprot ID   P42421
Organism   Bacillus subtilis strain SRCM117797     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 2133613..2144302
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QL281_RS11495 (QL281_11495) yxeA 2134518..2134865 (-) 348 WP_003227084.1 YxeA family protein -
  QL281_RS11500 (QL281_11500) yxdM 2134879..2136747 (-) 1869 WP_017696088.1 ABC transporter permease YxdM -
  QL281_RS11505 (QL281_11505) yxdL 2136722..2137495 (-) 774 WP_017696087.1 ABC transporter ATP-binding protein YxdL -
  QL281_RS11510 (QL281_11510) yxdK 2137639..2138616 (-) 978 WP_015385109.1 two-component system sensor histidine kinase YxdK -
  QL281_RS11515 (QL281_11515) braR 2138613..2139302 (-) 690 WP_003243527.1 two-component system response regulator YxdJ Regulator
  QL281_RS11520 (QL281_11520) iolJ 2139410..2140282 (-) 873 WP_014478478.1 6-phospho-5-dehydro-2-deoxy-D-gluconate aldolase -
  QL281_RS11525 (QL281_11525) iolI 2140303..2141139 (-) 837 WP_041054239.1 2-keto-myo-inositol isomerase -
  QL281_RS11530 (QL281_11530) iolH 2141225..2142094 (-) 870 WP_014481413.1 sugar phosphate isomerase/epimerase -
  QL281_RS11535 (QL281_11535) iolG 2142114..2143148 (-) 1035 WP_014481414.1 bifunctional inositol 2-dehydrogenase/D-chiro-inositol 1-dehydrogenase -

Sequence

Protein


Download         Length: 229 a.a.        Molecular weight: 26600.34 Da        Isoelectric Point: 4.8564

>NTDB_id=762263 QL281_RS11515 WP_003243527.1 2138613..2139302(-) (braR) [Bacillus subtilis strain SRCM117797]
MNKIMIVEDSEDIRGLLQNYLEKYGYQTVVAADFTAVLDVFLREKPDVVLLDINLPAYDGYYWCRQIRQHSTSPIIFISA
RSGEMDQVMAIENGGDDYIEKPFSYDIVLAKIKSQIRRAYGEYAAKQGEKVVEYAGVQLFVERFELRFQDEKSELSKKES
KLLEVLLERGEKVTSRDRLMEKTWDTDIFIDDNTLNVYITRLRKKLRELNAPVSIEAVRGEGYQLRAQS

Nucleotide


Download         Length: 690 bp        

>NTDB_id=762263 QL281_RS11515 WP_003243527.1 2138613..2139302(-) (braR) [Bacillus subtilis strain SRCM117797]
TTGAATAAAATCATGATTGTGGAAGACAGTGAAGACATTCGCGGACTATTGCAGAATTACCTTGAAAAATACGGTTATCA
AACAGTGGTCGCCGCGGATTTTACAGCTGTTCTTGATGTCTTTTTGCGGGAAAAGCCCGATGTGGTGCTGCTTGATATCA
ATTTGCCGGCATATGACGGATATTATTGGTGCCGGCAGATCCGCCAGCACTCCACAAGCCCGATCATCTTTATTTCTGCC
AGAAGCGGGGAAATGGATCAGGTGATGGCGATTGAAAATGGGGGAGACGATTATATCGAAAAACCGTTTTCTTATGATAT
TGTGCTGGCGAAAATCAAAAGCCAGATCCGGAGGGCGTACGGGGAGTACGCCGCAAAGCAGGGAGAGAAAGTGGTTGAAT
ATGCCGGCGTTCAGCTCTTTGTGGAACGGTTTGAACTGCGTTTTCAGGATGAAAAAAGCGAGCTTTCTAAAAAAGAAAGC
AAGCTTTTGGAAGTGCTGCTTGAGCGGGGAGAAAAGGTGACGAGTCGGGACCGTCTCATGGAAAAGACGTGGGACACCGA
CATATTCATCGATGATAATACACTTAACGTGTATATCACGCGGCTCAGAAAAAAACTGCGGGAGCTGAATGCGCCTGTTT
CTATTGAAGCGGTGCGGGGCGAAGGCTACCAGCTGAGGGCGCAGTCATGA

Domains

Predicted by InterProScan.

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(151-225)

Response regulator receiver domain (Response_reg)

(4-112)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB P42421

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

41.704

97.38

0.406