Detailed information    

insolico Bioinformatically predicted

Overview

Name   recU   Type   Machinery gene
Locus tag   OU819_RS07780 Genome accession   NZ_CP113428
Coordinates   1494279..1494881 (-) Length   200 a.a.
NCBI ID   WP_000155594.1    Uniprot ID   Q81SS2
Organism   Bacillus cereus strain NW6     
Function   plasmid transformation; homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1489279..1499881
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OU819_RS07760 (OU819_07760) dnaD 1489604..1490311 (+) 708 WP_000728549.1 DNA replication protein DnaD -
  OU819_RS07765 (OU819_07765) nth 1490327..1490974 (+) 648 WP_000933025.1 endonuclease III -
  OU819_RS07770 (OU819_07770) - 1490978..1491496 (+) 519 WP_000442686.1 YpoC family protein -
  OU819_RS07775 (OU819_07775) - 1491520..1494213 (-) 2694 WP_070171201.1 PBP1A family penicillin-binding protein -
  OU819_RS07780 (OU819_07780) recU 1494279..1494881 (-) 603 WP_000155594.1 Holliday junction resolvase RecU Machinery gene
  OU819_RS07785 (OU819_07785) - 1494985..1496010 (+) 1026 WP_070171200.1 DUF2515 domain-containing protein -
  OU819_RS07790 (OU819_07790) - 1496219..1496395 (-) 177 WP_001982922.1 hypothetical protein -
  OU819_RS07795 (OU819_07795) - 1496481..1496723 (+) 243 WP_001252043.1 hypothetical protein -
  OU819_RS07800 (OU819_07800) - 1496739..1497083 (+) 345 WP_000872959.1 YppE family protein -
  OU819_RS07805 (OU819_07805) - 1497109..1497300 (-) 192 WP_000242663.1 YppF family protein -
  OU819_RS07810 (OU819_07810) - 1497478..1497957 (+) 480 WP_000487704.1 YppG family protein -
  OU819_RS07815 (OU819_07815) - 1498113..1498541 (+) 429 WP_000546294.1 CotD family spore coat protein -
  OU819_RS07820 (OU819_07820) - 1498598..1499152 (+) 555 WP_000862921.1 DUF1273 domain-containing protein -
  OU819_RS07825 (OU819_07825) gpsB 1499250..1499588 (+) 339 WP_000622433.1 cell division regulator GpsB -

Sequence

Protein


Download         Length: 200 a.a.        Molecular weight: 23342.66 Da        Isoelectric Point: 9.5601

>NTDB_id=761904 OU819_RS07780 WP_000155594.1 1494279..1494881(-) (recU) [Bacillus cereus strain NW6]
MTIRYPNGKRYNQASQPHKTPIKKHTYSNRGMSLEEELNETNEYYLTHNIACVHKKPTPLQIVKVDYPARSAAVVKEAYF
KQPSTTDYNGVYKGKYIDFEAKETKNKTSFPLQNFHLHQIEHMKQVIAHNGIAFVIIKFTLFDELYLLDAKHIITFWNRQ
NTGGRKSITKEEIVEHGSLLSCGYHPRIDYIRVLDTVYFS

Nucleotide


Download         Length: 603 bp        

>NTDB_id=761904 OU819_RS07780 WP_000155594.1 1494279..1494881(-) (recU) [Bacillus cereus strain NW6]
ATGACCATTCGTTACCCAAATGGAAAACGGTACAATCAAGCTTCACAACCTCATAAAACACCAATTAAAAAACATACTTA
TAGTAACAGAGGTATGTCCCTTGAAGAGGAATTGAATGAAACAAATGAATATTACTTAACCCATAATATTGCATGTGTAC
ATAAAAAACCTACACCTCTTCAAATTGTAAAAGTAGATTACCCCGCTCGAAGTGCTGCAGTGGTAAAAGAGGCGTATTTT
AAACAACCTTCTACAACAGATTACAACGGTGTATATAAAGGGAAATACATCGATTTTGAAGCGAAAGAAACAAAAAATAA
AACCAGCTTTCCACTTCAAAACTTCCACCTTCATCAAATTGAACATATGAAGCAAGTAATTGCTCATAATGGAATTGCAT
TTGTTATTATTAAATTTACACTTTTTGATGAACTTTATTTATTAGATGCAAAACATATTATTACATTTTGGAATCGTCAA
AATACTGGTGGACGAAAATCGATTACGAAAGAAGAAATAGTAGAGCATGGATCTTTATTATCATGCGGTTATCACCCTCG
GATTGATTATATCCGTGTACTAGACACGGTTTATTTTTCGTGA

Domains

Predicted by InterproScan.

Recombination protein U (RecU)

(30-195)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q81SS2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recU Bacillus subtilis subsp. subtilis str. 168

62.5

100

0.625