Detailed information NTG0761300

Bioinformatically predicted

Overview

• Name: comM
• Type: Machinery gene
• Locus tag: OSV15_RS03055
• Genome accession: NZ_CP113257
• Coordinates: 659631..660695 (+)
• Length: 354 a.a.
• NCBI ID: WP_102839584.1
• Uniprot ID: A0AA47E2Z0
• Organism: Stutzerimonas frequens strain TF18
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 654631..665695

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OSV15_RS03040 (OSV15_03040)	-	654755..655549 (+)	795	WP_063539609.1	thermonuclease family protein	-
OSV15_RS03045 (OSV15_03045)	-	655693..656961 (+)	1269	WP_102839582.1	malic enzyme-like NAD(P)-binding protein	-
OSV15_RS03050 (OSV15_03050)	-	657029..659449 (-)	2421	WP_267932046.1	penicillin-binding protein 1A	-
OSV15_RS03055 (OSV15_03055)	comM	659631..660695 (+)	1065	WP_102839584.1	pilus assembly protein PilM	Machinery gene
OSV15_RS03060 (OSV15_03060)	-	660695..661267 (+)	573	WP_267932047.1	PilN domain-containing protein	-
OSV15_RS03065 (OSV15_03065)	pilO	661264..661887 (+)	624	WP_267932048.1	type 4a pilus biogenesis protein PilO	-
OSV15_RS03070 (OSV15_03070)	pilP	661884..662411 (+)	528	WP_125868795.1	type 4a pilus biogenesis lipoprotein PilP	-
OSV15_RS03075 (OSV15_03075)	pilQ	662465..664555 (+)	2091	WP_267932049.1	type IV pilus secretin PilQ	Machinery gene
OSV15_RS03080 (OSV15_03080)	aroK	664561..665106 (+)	546	WP_267932938.1	shikimate kinase AroK	-

Sequence

Protein

• Length: 354 a.a.
• Molecular weight: 37738.15 Da
• Isoelectric Point: 4.6346

>NTDB_id=761300 OSV15_RS03055 WP_102839584.1 659631..660695(+) (comM) [Stutzerimonas frequens strain TF18]
MLGLFTKKANTLLGIDISSTSVKLLELSRSGNRYRVEAYAVEPLPPNAVVEKNIAELEGVGQALQRVVAKAKTGCKSAVV
AVSGSAVITKTIEMDAGLSDEELENQLKIEADQYIPYPLEEVAIDFEVQGPAPRAPGRVEVLLAACRKENVEVREAALAL
AGLAAKVVDVEAYALERSYDLLAPQLGSAHGELTVAVVDIGATMTTLSVLHNGRTIYSREQLFGGRQLTEEIQRRYGLSQ
EEAGLAKKQGGLPDDYDSEVLLPFKEAVVQQVSRSLQFFFAAGQFHDVDCILLAGGTASIPGLDHLIQQKIGTQTLVANP
FADMALSSKVNAGALASDAPSLMIACGLALRSFD

Nucleotide

• Length: 1065 bp

>NTDB_id=761300 OSV15_RS03055 WP_102839584.1 659631..660695(+) (comM) [Stutzerimonas frequens strain TF18]
GTGCTAGGGCTCTTCACTAAGAAAGCGAACACGCTGCTTGGGATCGATATCAGTTCGACCTCAGTCAAGCTTCTCGAATT
AAGTCGATCGGGGAACCGCTACCGGGTTGAGGCTTATGCGGTTGAGCCGCTCCCACCAAATGCCGTGGTCGAAAAGAACA
TCGCTGAACTGGAAGGCGTTGGCCAGGCTCTGCAACGCGTGGTCGCAAAGGCTAAGACCGGCTGCAAGTCAGCCGTGGTA
GCTGTCTCCGGCTCAGCGGTGATCACCAAGACGATCGAGATGGACGCCGGGCTGTCCGACGAAGAGCTGGAAAATCAGCT
GAAGATTGAGGCCGACCAATATATTCCCTATCCGTTGGAAGAGGTGGCGATCGACTTTGAGGTCCAGGGGCCCGCGCCGC
GTGCGCCCGGTCGGGTGGAGGTTCTGCTCGCTGCCTGTCGCAAGGAAAACGTCGAGGTGCGCGAGGCGGCGCTGGCCCTG
GCCGGACTCGCCGCGAAGGTCGTTGATGTCGAGGCCTATGCGCTCGAGCGCTCCTATGACCTTCTGGCGCCGCAGTTGGG
GAGCGCGCATGGTGAACTGACCGTCGCTGTCGTGGATATCGGCGCAACGATGACGACTCTGAGCGTCCTGCATAACGGAC
GCACCATATACAGTCGTGAGCAATTGTTCGGGGGGCGGCAGCTGACGGAGGAAATCCAACGCCGTTATGGGCTGTCACAA
GAAGAGGCTGGCCTCGCTAAAAAGCAGGGAGGGCTTCCTGATGACTACGACAGTGAGGTTTTGCTTCCGTTCAAAGAAGC
GGTCGTTCAGCAGGTCTCACGCTCGCTGCAATTCTTCTTCGCTGCTGGGCAGTTTCATGATGTCGATTGCATTCTGCTTG
CTGGTGGAACGGCTTCCATCCCGGGGCTTGATCATCTCATTCAGCAGAAGATCGGCACCCAGACTCTAGTTGCCAATCCG
TTTGCCGATATGGCTTTGAGTAGCAAGGTCAACGCAGGCGCGCTGGCCAGTGATGCGCCCTCGCTGATGATTGCGTGTGG
GTTGGCGCTAAGGAGTTTCGACTGA

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (14-353)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comM	Acinetobacter nosocomialis M2	56.497	100	0.565
pilM	Acinetobacter baumannii D1279779	56.497	100	0.565
comM	Acinetobacter baylyi ADP1	53.39	100	0.534
pilM	Legionella pneumophila strain ERS1305867	46.893	100	0.469