Detailed information
Overview
| Name | comGG/cglG | Type | Machinery gene |
| Locus tag | OTU45_RS10790 | Genome accession | NZ_CP113114 |
| Coordinates | 2094192..2094605 (-) | Length | 137 a.a. |
| NCBI ID | WP_000265624.1 | Uniprot ID | - |
| Organism | Streptococcus pneumoniae strain NP1 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2089192..2099605
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| OTU45_RS10760 (OTU45_10760) | - | 2089887..2090711 (-) | 825 | WP_000727904.1 | membrane protein insertase YidC | - |
| OTU45_RS10765 (OTU45_10765) | rnpA | 2090686..2091057 (-) | 372 | WP_000739246.1 | ribonuclease P protein component | - |
| OTU45_RS10770 (OTU45_10770) | - | 2091074..2091205 (-) | 132 | WP_000768904.1 | hypothetical protein | - |
| OTU45_RS10775 (OTU45_10775) | - | 2091206..2092396 (-) | 1191 | WP_000167766.1 | acetate kinase | - |
| OTU45_RS10780 (OTU45_10780) | comYH | 2092447..2093400 (-) | 954 | WP_000345101.1 | class I SAM-dependent methyltransferase | Machinery gene |
| OTU45_RS10785 (OTU45_10785) | - | 2093461..2094055 (-) | 595 | Protein_2108 | class I SAM-dependent methyltransferase | - |
| OTU45_RS10790 (OTU45_10790) | comGG/cglG | 2094192..2094605 (-) | 414 | WP_000265624.1 | competence type IV pilus minor pilin ComGG | Machinery gene |
| OTU45_RS10795 (OTU45_10795) | comGF/cglF | 2094583..2095044 (-) | 462 | WP_000250542.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| OTU45_RS10800 (OTU45_10800) | comGE/cglE | 2095007..2095309 (-) | 303 | WP_000413382.1 | competence type IV pilus minor pilin ComGE | Machinery gene |
| OTU45_RS10805 (OTU45_10805) | comGD/cglD | 2095272..2095676 (-) | 405 | WP_000588013.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| OTU45_RS10810 (OTU45_10810) | comGC/cglC | 2095669..2095935 (-) | 267 | WP_050073122.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| OTU45_RS10815 (OTU45_10815) | - | 2095937..2096194 (-) | 258 | WP_000698513.1 | hypothetical protein | - |
| OTU45_RS10820 (OTU45_10820) | lytA | 2096426..2097382 (-) | 957 | WP_054436120.1 | N-acetylmuramoyl-L-alanine amidase LytA | - |
| OTU45_RS10825 (OTU45_10825) | - | 2097382..2097717 (-) | 336 | WP_001186204.1 | phage holin | - |
| OTU45_RS10830 (OTU45_10830) | - | 2097721..2098020 (-) | 300 | WP_001811580.1 | hypothetical protein | - |
| OTU45_RS10835 (OTU45_10835) | - | 2098030..2098380 (-) | 351 | WP_054368148.1 | hypothetical protein | - |
| OTU45_RS10840 (OTU45_10840) | - | 2098383..2098586 (-) | 204 | WP_001091107.1 | hypothetical protein | - |
| OTU45_RS10845 (OTU45_10845) | - | 2098567..2098683 (-) | 117 | WP_001063632.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 137 a.a. Molecular weight: 15955.42 Da Isoelectric Point: 10.2472
>NTDB_id=760371 OTU45_RS10790 WP_000265624.1 2094192..2094605(-) (comGG/cglG) [Streptococcus pneumoniae strain NP1]
MWKKKKVKAGVLLYAVTIAAIFSLLLQFYLNRQVAHYQDYALNKEKLVAFAMAKRTKDKVEQESGEQVFNLGQVSYQNKK
TGLVTRVRTDKSQYEFLFPSVKIKEEKRDKKEEVATDSSEKVEKKKSEEKPEKKENS
MWKKKKVKAGVLLYAVTIAAIFSLLLQFYLNRQVAHYQDYALNKEKLVAFAMAKRTKDKVEQESGEQVFNLGQVSYQNKK
TGLVTRVRTDKSQYEFLFPSVKIKEEKRDKKEEVATDSSEKVEKKKSEEKPEKKENS
Nucleotide
Download Length: 414 bp
>NTDB_id=760371 OTU45_RS10790 WP_000265624.1 2094192..2094605(-) (comGG/cglG) [Streptococcus pneumoniae strain NP1]
GTGTGGAAAAAGAAAAAAGTTAAGGCAGGTGTTCTCCTCTACGCAGTCACCATAGCAGCCATCTTTAGTCTTTTGTTGCA
ATTTTATTTGAACCGACAAGTCGCCCACTATCAAGACTATGCTTTGAATAAAGAAAAATTGGTTGCTTTTGCTATGGCTA
AACGAACCAAAGATAAGGTTGAGCAAGAAAGTGGGGAACAGGTTTTTAATCTAGGTCAGGTAAGCTATCAAAACAAGAAA
ACTGGCTTAGTGACGAGGGTTCGTACGGATAAGAGCCAATATGAGTTTCTGTTTCCTTCAGTCAAAATCAAAGAAGAGAA
AAGAGATAAAAAGGAAGAGGTAGCGACCGATTCAAGCGAAAAAGTGGAGAAGAAAAAATCAGAAGAGAAGCCTGAAAAGA
AAGAGAATTCCTAG
GTGTGGAAAAAGAAAAAAGTTAAGGCAGGTGTTCTCCTCTACGCAGTCACCATAGCAGCCATCTTTAGTCTTTTGTTGCA
ATTTTATTTGAACCGACAAGTCGCCCACTATCAAGACTATGCTTTGAATAAAGAAAAATTGGTTGCTTTTGCTATGGCTA
AACGAACCAAAGATAAGGTTGAGCAAGAAAGTGGGGAACAGGTTTTTAATCTAGGTCAGGTAAGCTATCAAAACAAGAAA
ACTGGCTTAGTGACGAGGGTTCGTACGGATAAGAGCCAATATGAGTTTCTGTTTCCTTCAGTCAAAATCAAAGAAGAGAA
AAGAGATAAAAAGGAAGAGGTAGCGACCGATTCAAGCGAAAAAGTGGAGAAGAAAAAATCAGAAGAGAAGCCTGAAAAGA
AAGAGAATTCCTAG
Domains
No domain identified.
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGG/cglG | Streptococcus pneumoniae Rx1 |
99.27 |
100 |
0.993 |
| comGG/cglG | Streptococcus pneumoniae D39 |
99.27 |
100 |
0.993 |
| comGG/cglG | Streptococcus pneumoniae R6 |
99.27 |
100 |
0.993 |
| comGG/cglG | Streptococcus pneumoniae TIGR4 |
99.27 |
100 |
0.993 |
| comGG/cglG | Streptococcus mitis SK321 |
87.591 |
100 |
0.876 |
| comGG/cglG | Streptococcus mitis NCTC 12261 |
89.256 |
88.321 |
0.788 |
| comYG | Streptococcus mutans UA140 |
38.806 |
97.81 |
0.38 |
| comYG | Streptococcus mutans UA159 |
38.806 |
97.81 |
0.38 |