Detailed information    

insolico Bioinformatically predicted

Overview


Name   dprA   Type   Machinery gene
Locus tag   OSV60_RS17670 Genome accession   NZ_CP113077
Coordinates   3746939..3748069 (+) Length   376 a.a.
NCBI ID   WP_032051424.1    Uniprot ID   A0A009HL09
Organism   Acinetobacter baumannii strain 86II/2C     
Function   ssDNA binding; loading RecA onto ssDNA (predicted from homology)   
DNA processing

Genomic Context


Location: 3741939..3753069
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OSV60_RS17645 (OSV60_17645) - 3742238..3742444 (-) 207 WP_000182542.1 hypothetical protein -
  OSV60_RS17650 (OSV60_17650) - 3742498..3744573 (-) 2076 WP_098714167.1 TonB-dependent copper receptor -
  OSV60_RS17655 (OSV60_17655) - 3744646..3745074 (-) 429 WP_000231981.1 DUF2946 family protein -
  OSV60_RS17660 (OSV60_17660) def 3745111..3745641 (-) 531 WP_001196539.1 peptide deformylase -
  OSV60_RS17665 (OSV60_17665) tsaP 3745764..3746918 (+) 1155 WP_000755282.1 LysM peptidoglycan-binding domain-containing protein Machinery gene
  OSV60_RS17670 (OSV60_17670) dprA 3746939..3748069 (+) 1131 WP_032051424.1 DNA-processing protein DprA Machinery gene
  OSV60_RS17675 (OSV60_17675) - 3748120..3748689 (+) 570 WP_000633612.1 L-threonylcarbamoyladenylate synthase -
  OSV60_RS17680 (OSV60_17680) - 3749081..3750001 (-) 921 WP_000084546.1 DMT family transporter -
  OSV60_RS17685 (OSV60_17685) - 3750107..3750757 (-) 651 WP_001984979.1 TetR/AcrR family transcriptional regulator -
  OSV60_RS17690 (OSV60_17690) - 3750894..3752108 (+) 1215 WP_000372838.1 MFS transporter -
  OSV60_RS17695 (OSV60_17695) - 3752130..3752894 (+) 765 WP_000786954.1 AraC family transcriptional regulator -

Sequence


Protein


Download         Length: 376 a.a.        Molecular weight: 41960.52 Da        Isoelectric Point: 6.5805

>NTDB_id=759986 OSV60_RS17670 WP_032051424.1 3746939..3748069(+) (dprA) [Acinetobacter baumannii strain 86II/2C]
MLTQLSSHHYHTLKVWYLVQHSLVSFKKIIDYFGNCEKATQPDCLAKWSSLGLHANHLKRVNEFQTPQGQAQFEQLVQQV
RQHTDFILTPDDSGYPTQLLPYTDHPPIIFGKGQAQALLQPQIAIVGSRKPSPHGRQVAYDFAYYLSEKGFFISSGLAYG
IDEAAHQGASAHQRTIAVTGTGLDTTYPAQNKKLAEHILAQNGAIITEFLPGTPPLQQHFPRRNRIVSGLSLGVLVVEAT
LKSGSLITANKAAEQGKTVFAIPGHIYSEFHQGCHQLIREGAILIDHPEQIIEDLALPTQWQSQQQNQTEETNTNTPEIP
EHLIDLYQSLDWVGQNIDQLVVHHNIPVSELTSSLMELELLGLCMQQSGLYLRCRS

Nucleotide


Download         Length: 1131 bp        

>NTDB_id=759986 OSV60_RS17670 WP_032051424.1 3746939..3748069(+) (dprA) [Acinetobacter baumannii strain 86II/2C]
ATGCTCACTCAACTTTCTTCACACCACTACCACACACTTAAAGTGTGGTATTTGGTGCAGCACTCTTTAGTCAGCTTTAA
AAAAATTATTGATTATTTTGGAAATTGTGAAAAAGCCACTCAACCTGATTGTTTAGCAAAGTGGTCCTCTCTGGGGCTAC
ATGCTAATCACTTAAAGCGTGTAAACGAATTTCAAACGCCCCAAGGTCAAGCGCAGTTTGAACAACTTGTACAACAAGTT
CGTCAGCATACGGATTTTATTTTAACGCCGGATGACTCTGGCTATCCCACTCAATTACTTCCTTATACAGATCACCCACC
TATTATTTTTGGGAAAGGTCAAGCGCAAGCTTTATTGCAACCTCAAATTGCGATTGTCGGTAGCCGAAAACCAAGCCCAC
ATGGACGACAGGTCGCTTATGATTTTGCCTATTACTTAAGTGAAAAGGGCTTTTTCATTAGTAGCGGTCTGGCTTATGGC
ATTGATGAAGCCGCTCATCAAGGTGCATCTGCTCATCAACGTACCATTGCAGTGACGGGTACGGGCTTAGACACTACTTA
TCCAGCTCAAAATAAAAAACTTGCAGAACATATTTTGGCTCAAAACGGCGCCATTATTACTGAGTTTTTACCGGGTACAC
CGCCATTACAACAGCATTTTCCACGTAGAAACCGAATTGTCAGCGGTTTGAGTTTAGGCGTTTTGGTGGTAGAAGCAACA
TTAAAAAGTGGCTCACTCATCACGGCCAATAAAGCTGCTGAACAAGGTAAAACCGTATTCGCGATTCCGGGCCATATTTA
TAGCGAGTTTCATCAAGGATGCCATCAACTTATCCGTGAAGGTGCAATTTTAATCGACCATCCTGAACAGATTATTGAGG
ATCTTGCTTTACCAACCCAATGGCAAAGTCAGCAACAAAATCAAACTGAAGAAACTAATACGAATACTCCAGAAATTCCT
GAGCATTTGATTGACCTTTATCAGTCTTTAGACTGGGTGGGACAAAATATTGACCAGCTTGTAGTTCACCATAATATTCC
AGTTTCTGAACTGACCTCTTCACTAATGGAACTAGAACTACTCGGTTTATGTATGCAACAATCAGGGCTGTATTTACGTT
GTCGTTCTTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A009HL09

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dprA Acinetobacter baumannii strain A118

98.936

100

0.989

  dprA Acinetobacter baumannii D1279779

98.67

100

0.987

  dprA Acinetobacter baylyi ADP1

70.604

100

0.715

  dprA Vibrio cholerae strain A1552

43.505

88.032

0.383