Detailed information    

insolico Bioinformatically predicted

Overview


Name   tsaP   Type   Machinery gene
Locus tag   OSV60_RS17665 Genome accession   NZ_CP113077
Coordinates   3745764..3746918 (+) Length   384 a.a.
NCBI ID   WP_000755282.1    Uniprot ID   -
Organism   Acinetobacter baumannii strain 86II/2C     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context


Location: 3740764..3751918
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OSV60_RS17640 (OSV60_17640) - 3740955..3742169 (+) 1215 WP_098714168.1 oxygenase MpaB family protein -
  OSV60_RS17645 (OSV60_17645) - 3742238..3742444 (-) 207 WP_000182542.1 hypothetical protein -
  OSV60_RS17650 (OSV60_17650) - 3742498..3744573 (-) 2076 WP_098714167.1 TonB-dependent copper receptor -
  OSV60_RS17655 (OSV60_17655) - 3744646..3745074 (-) 429 WP_000231981.1 DUF2946 family protein -
  OSV60_RS17660 (OSV60_17660) def 3745111..3745641 (-) 531 WP_001196539.1 peptide deformylase -
  OSV60_RS17665 (OSV60_17665) tsaP 3745764..3746918 (+) 1155 WP_000755282.1 LysM peptidoglycan-binding domain-containing protein Machinery gene
  OSV60_RS17670 (OSV60_17670) dprA 3746939..3748069 (+) 1131 WP_032051424.1 DNA-processing protein DprA Machinery gene
  OSV60_RS17675 (OSV60_17675) - 3748120..3748689 (+) 570 WP_000633612.1 L-threonylcarbamoyladenylate synthase -
  OSV60_RS17680 (OSV60_17680) - 3749081..3750001 (-) 921 WP_000084546.1 DMT family transporter -
  OSV60_RS17685 (OSV60_17685) - 3750107..3750757 (-) 651 WP_001984979.1 TetR/AcrR family transcriptional regulator -

Sequence


Protein


Download         Length: 384 a.a.        Molecular weight: 42336.25 Da        Isoelectric Point: 8.5816

>NTDB_id=759985 OSV60_RS17665 WP_000755282.1 3745764..3746918(+) (tsaP) [Acinetobacter baumannii strain 86II/2C]
MKKVFNGMVNFHALGIKKHLLALALCTGVAIGTIAEVHATSPNHNPPSLKSNAPNVYVVKRGDTLWDISGHFLNKPWRWP
EIWASNQHVKNPHWIYPGDRLLLCSLDGRPLVGKDEGDGCVGIIRRYTGQTTNLQPQVRVEALNNSVPVIPLEHIKQWLE
NSTILPADSITNTPYIVGTADQRVLAGKGQTIYARGQGLINGQRYAVYREGEPYYFTDNKGKKHSLGIELLQVASGVAVS
SEKDITTLELTDSYNAEVRRGDRVMPEEQATLPTLFYPVDAKQVTDGGKIIRVMGSIGRAAKNSVVTLDRGTTQGVQVGQ
VFDITQQGESIRDPKTKEVIQLPGQQIGSLMVFRTFDQLSYAYVLESDLPIKVGSSIQPPQFND

Nucleotide


Download         Length: 1155 bp        

>NTDB_id=759985 OSV60_RS17665 WP_000755282.1 3745764..3746918(+) (tsaP) [Acinetobacter baumannii strain 86II/2C]
ATGAAAAAGGTTTTTAACGGCATGGTTAATTTTCATGCCTTGGGGATAAAGAAGCATTTACTTGCTTTGGCGCTCTGTAC
AGGTGTCGCAATCGGTACGATAGCAGAGGTTCATGCAACCAGTCCGAACCATAATCCACCCTCCCTTAAAAGTAATGCAC
CCAATGTATATGTTGTAAAACGTGGGGATACTTTATGGGATATTTCAGGACATTTTCTAAATAAACCATGGCGTTGGCCT
GAAATCTGGGCGAGCAACCAACATGTTAAAAATCCACACTGGATCTATCCGGGTGACCGATTACTATTATGTAGCCTAGA
TGGGCGTCCTTTAGTCGGTAAAGATGAGGGGGACGGCTGTGTCGGTATTATCCGTCGCTATACAGGTCAAACCACAAACC
TACAACCACAAGTTCGCGTCGAAGCATTAAATAATAGCGTTCCGGTTATTCCACTTGAACATATTAAACAGTGGTTAGAG
AACAGTACTATTTTACCAGCCGACTCAATTACCAACACACCTTATATTGTTGGTACAGCCGATCAACGTGTACTTGCAGG
AAAAGGCCAGACTATTTATGCACGAGGACAAGGCTTAATTAATGGGCAGCGTTATGCAGTCTACCGAGAAGGTGAACCTT
ACTATTTCACAGACAATAAAGGTAAAAAGCATAGTTTAGGGATTGAGTTACTACAAGTTGCTTCAGGTGTTGCGGTATCT
TCTGAAAAAGATATTACTACATTAGAACTAACAGATAGTTATAACGCTGAAGTACGTCGTGGCGATCGTGTTATGCCTGA
AGAGCAAGCTACTTTGCCAACATTATTTTACCCAGTAGATGCGAAGCAAGTGACGGATGGTGGCAAGATTATTCGTGTCA
TGGGTTCAATTGGTAGAGCTGCAAAAAATAGTGTAGTGACTTTGGACCGCGGTACAACCCAGGGCGTTCAAGTAGGCCAA
GTTTTTGATATTACTCAACAAGGTGAATCAATTCGCGACCCTAAAACCAAAGAAGTAATTCAACTTCCTGGCCAACAAAT
TGGCAGTCTAATGGTTTTTAGAACTTTTGATCAGCTAAGTTATGCTTATGTTTTAGAGAGCGATTTACCAATTAAGGTTG
GTTCAAGCATTCAGCCACCTCAATTTAATGATTAA

Domains


Predicted by InterproScan.

(57-102)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  tsaP Acinetobacter baumannii D1279779

99.219

100

0.992