Detailed information    

insolico Bioinformatically predicted

Overview


Name   dprA   Type   Machinery gene
Locus tag   OSV61_RS17150 Genome accession   NZ_CP113069
Coordinates   3644481..3645611 (+) Length   376 a.a.
NCBI ID   WP_065718311.1    Uniprot ID   -
Organism   Acinetobacter baumannii strain 29D2     
Function   ssDNA binding; loading RecA onto ssDNA (predicted from homology)   
DNA processing

Genomic Context


Location: 3639481..3650611
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OSV61_RS17125 (OSV61_17125) - 3639741..3639947 (-) 207 WP_000182542.1 hypothetical protein -
  OSV61_RS17130 (OSV61_17130) - 3640001..3642115 (-) 2115 WP_065718280.1 TonB-dependent copper receptor -
  OSV61_RS17135 (OSV61_17135) - 3642188..3642616 (-) 429 WP_000231984.1 DUF2946 family protein -
  OSV61_RS17140 (OSV61_17140) def 3642653..3643183 (-) 531 WP_001196539.1 peptide deformylase -
  OSV61_RS17145 (OSV61_17145) tsaP 3643306..3644460 (+) 1155 WP_065718281.1 LysM peptidoglycan-binding domain-containing protein Machinery gene
  OSV61_RS17150 (OSV61_17150) dprA 3644481..3645611 (+) 1131 WP_065718311.1 DNA-processing protein DprA Machinery gene
  OSV61_RS17155 (OSV61_17155) - 3645662..3646231 (+) 570 WP_000633612.1 Sua5/YciO/YrdC/YwlC family protein -
  OSV61_RS17160 (OSV61_17160) - 3646624..3647544 (-) 921 WP_000084546.1 DMT family transporter -
  OSV61_RS17165 (OSV61_17165) - 3647650..3648300 (-) 651 WP_001984979.1 TetR/AcrR family transcriptional regulator -
  OSV61_RS17170 (OSV61_17170) - 3648437..3649651 (+) 1215 WP_000372838.1 MFS transporter -
  OSV61_RS17175 (OSV61_17175) - 3649673..3650437 (+) 765 WP_000786954.1 AraC family transcriptional regulator -

Sequence


Protein


Download         Length: 376 a.a.        Molecular weight: 41973.51 Da        Isoelectric Point: 6.4055

>NTDB_id=759695 OSV61_RS17150 WP_065718311.1 3644481..3645611(+) (dprA) [Acinetobacter baumannii strain 29D2]
MLTQLSSHHYHTLKVWYLVQHSLVSFKKIIDYFGNCEKATQPDGLAKWSSLGLHANHLKRVNEFQTPQGQTQFEQLVQQV
CQYTDFILTPDDSGYPTQLLPYTDYPPIIFGKGQAQALLQPQIAIVGSRKPSPHGRQVAYDFAYYLSEKGFFISSGLAYG
IDEAAHQGASTHQRTIAVTGTGLDTTYPAQNKKLAEHILAQNGAIITEFLPSTPPLQQHFPRRNRIVSGLSLGVLVVEAT
LKSGSLITANKAAEQGKTVFAIPGHIYSEFHQGCHQLIREGAILIDHPEQIIEDLALPTQWQSQQQNQTEEANTNTPEIP
EHLIDLYQSLDWVGQNIDQLVVHHNIPVSELTSSLMELELLGLCMQQSGLYLRCRS

Nucleotide


Download         Length: 1131 bp        

>NTDB_id=759695 OSV61_RS17150 WP_065718311.1 3644481..3645611(+) (dprA) [Acinetobacter baumannii strain 29D2]
ATGCTCACTCAACTTTCTTCACACCACTACCACACACTTAAAGTGTGGTATTTGGTGCAGCACTCTTTAGTCAGCTTTAA
AAAAATTATTGATTATTTTGGAAATTGTGAAAAAGCCACTCAACCTGATGGTTTAGCAAAGTGGTCCTCTCTGGGGCTAC
ATGCTAATCACTTAAAACGTGTAAACGAATTTCAAACGCCCCAAGGTCAAACGCAGTTTGAACAACTTGTACAACAAGTT
TGTCAGTATACGGATTTTATTTTAACGCCGGATGACTCAGGCTATCCCACTCAATTACTTCCTTATACAGATTATCCACC
TATTATTTTTGGGAAAGGTCAAGCACAAGCTTTATTGCAACCTCAGATTGCGATTGTCGGTAGCCGAAAACCAAGCCCAC
ATGGACGACAGGTCGCTTATGATTTTGCTTACTACTTAAGTGAAAAGGGCTTTTTCATTAGTAGTGGTCTGGCTTATGGC
ATTGATGAAGCCGCTCATCAAGGTGCATCTACTCATCAACGTACCATTGCAGTGACGGGTACGGGCTTAGACACTACTTA
TCCAGCTCAAAATAAAAAACTTGCAGAACATATTTTGGCTCAAAACGGCGCCATTATTACTGAGTTTTTACCGAGTACAC
CGCCATTACAACAGCATTTTCCACGTAGAAACCGAATTGTCAGCGGTTTGAGTTTAGGCGTTTTGGTGGTAGAAGCGACA
TTAAAAAGTGGCTCACTCATCACGGCCAATAAAGCTGCTGAACAAGGTAAAACCGTATTCGCGATTCCGGGCCATATTTA
TAGCGAGTTTCATCAAGGATGCCATCAACTTATCCGTGAAGGTGCAATTTTAATCGATCATCCTGAACAGATTATTGAAG
ATCTTGCTTTACCCACTCAATGGCAAAGTCAGCAACAGAATCAAACTGAAGAAGCTAATACGAATACTCCAGAAATTCCT
GAGCATTTGATTGACCTTTATCAGTCTTTAGACTGGGTGGGACAAAATATTGACCAGCTTGTAGTTCACCATAATATTCC
AGTTTCTGAACTAACCTCTTCACTAATGGAACTAGAACTACTCGGTTTATGTATGCAACAATCAGGGCTGTATTTACGTT
GTCGTTCTTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dprA Acinetobacter baumannii strain A118

97.872

100

0.979

  dprA Acinetobacter baumannii D1279779

97.606

100

0.976

  dprA Acinetobacter baylyi ADP1

70.079

100

0.71

  dprA Vibrio cholerae strain A1552

43.202

88.032

0.38