Detailed information    

insolico Bioinformatically predicted

Overview


Name   tsaP   Type   Machinery gene
Locus tag   OSV61_RS17145 Genome accession   NZ_CP113069
Coordinates   3643306..3644460 (+) Length   384 a.a.
NCBI ID   WP_065718281.1    Uniprot ID   -
Organism   Acinetobacter baumannii strain 29D2     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context


Location: 3638306..3649460
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OSV61_RS17120 (OSV61_17120) - 3638457..3639671 (+) 1215 WP_065718279.1 oxygenase MpaB family protein -
  OSV61_RS17125 (OSV61_17125) - 3639741..3639947 (-) 207 WP_000182542.1 hypothetical protein -
  OSV61_RS17130 (OSV61_17130) - 3640001..3642115 (-) 2115 WP_065718280.1 TonB-dependent copper receptor -
  OSV61_RS17135 (OSV61_17135) - 3642188..3642616 (-) 429 WP_000231984.1 DUF2946 family protein -
  OSV61_RS17140 (OSV61_17140) def 3642653..3643183 (-) 531 WP_001196539.1 peptide deformylase -
  OSV61_RS17145 (OSV61_17145) tsaP 3643306..3644460 (+) 1155 WP_065718281.1 LysM peptidoglycan-binding domain-containing protein Machinery gene
  OSV61_RS17150 (OSV61_17150) dprA 3644481..3645611 (+) 1131 WP_065718311.1 DNA-processing protein DprA Machinery gene
  OSV61_RS17155 (OSV61_17155) - 3645662..3646231 (+) 570 WP_000633612.1 Sua5/YciO/YrdC/YwlC family protein -
  OSV61_RS17160 (OSV61_17160) - 3646624..3647544 (-) 921 WP_000084546.1 DMT family transporter -
  OSV61_RS17165 (OSV61_17165) - 3647650..3648300 (-) 651 WP_001984979.1 TetR/AcrR family transcriptional regulator -

Sequence


Protein


Download         Length: 384 a.a.        Molecular weight: 42345.26 Da        Isoelectric Point: 8.2524

>NTDB_id=759694 OSV61_RS17145 WP_065718281.1 3643306..3644460(+) (tsaP) [Acinetobacter baumannii strain 29D2]
MKKVFNGMVNFHALGIKKHLLALALCTGVAIGTIAEVHATSPNHNPPSLKSNAPNVYVVKRGDTLWDISGHFLNKPWRWP
EIWASNQHVKNPHWIYPGDRLLLCSLDGRPLVGKDEGDGCVGIIRRYTGQTTNLQPQVHVEALNNSVPVIPLEHIKQWLE
NSTILPAESITNTPYIVGTADQRVLAGKGQTIYARGQGLINGQRYAVYREGEPYYFTDNKGKKHSLGIELLQVASGVAVS
SEKDITTLELTDSYNAEVRRGDRVMPEEQATLPTLFYPVDAKQVTDGGKIIRVMGSIGRAAKNSVVTLDRGTTQGIQVGQ
VFDITQQGESIRDPKTKEVIQLPGQQIGSLMVFRTFDQLSYAYVLESDLPIKVGSSIQPPQFND

Nucleotide


Download         Length: 1155 bp        

>NTDB_id=759694 OSV61_RS17145 WP_065718281.1 3643306..3644460(+) (tsaP) [Acinetobacter baumannii strain 29D2]
ATGAAAAAGGTTTTTAACGGCATGGTTAATTTTCATGCCTTGGGGATAAAGAAGCATTTACTTGCTTTGGCGCTCTGTAC
AGGTGTCGCAATCGGTACGATAGCAGAGGTTCATGCAACCAGTCCGAACCATAATCCACCCTCACTAAAAAGTAATGCAC
CCAATGTATATGTTGTAAAACGTGGGGATACTTTATGGGATATTTCAGGACATTTTCTAAATAAACCATGGCGTTGGCCT
GAAATCTGGGCGAGCAACCAACATGTTAAAAATCCGCACTGGATCTATCCGGGTGACCGATTACTATTATGTAGCCTAGA
TGGGCGTCCTTTAGTCGGTAAAGATGAGGGTGACGGCTGTGTCGGTATTATCCGTCGCTATACAGGTCAAACCACAAACC
TGCAACCACAAGTTCATGTCGAAGCATTAAATAATAGCGTTCCGGTTATTCCACTTGAACATATTAAACAGTGGTTAGAG
AACAGTACTATTTTACCAGCCGAATCAATTACCAACACACCTTATATTGTTGGTACAGCCGATCAACGGGTACTTGCAGG
AAAAGGCCAGACCATTTACGCACGAGGACAAGGCTTAATTAATGGGCAGCGTTATGCCGTTTACCGAGAAGGTGAACCTT
ACTATTTCACAGACAATAAAGGTAAAAAGCATAGTTTAGGGATTGAGCTACTACAGGTTGCTTCAGGTGTTGCGGTATCT
TCTGAAAAAGATATTACTACATTAGAACTAACAGATAGTTATAACGCTGAAGTACGTCGTGGCGATCGTGTTATGCCTGA
AGAACAAGCTACTTTGCCAACATTATTTTACCCAGTAGATGCGAAGCAAGTGACGGATGGTGGCAAGATTATTCGTGTCA
TGGGTTCAATTGGTAGAGCTGCAAAAAATAGTGTAGTGACTTTGGATCGCGGTACAACCCAGGGCATTCAAGTAGGCCAA
GTTTTTGATATTACTCAACAAGGTGAATCAATTCGCGACCCTAAAACCAAAGAAGTAATTCAACTTCCTGGCCAACAAAT
TGGCAGTCTAATGGTTTTTAGAACTTTTGATCAGCTAAGTTATGCTTATGTTTTAGAGAGCGATTTACCAATTAAGGTTG
GTTCAAGCATTCAGCCACCTCAATTTAATGATTAA

Domains


Predicted by InterproScan.

(57-102)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  tsaP Acinetobacter baumannii D1279779

98.958

100

0.99