Detailed information    

insolico Bioinformatically predicted

Overview

Name   mecA   Type   Regulator
Locus tag   ORF34_RS06390 Genome accession   NZ_CP112873
Coordinates   1230873..1231529 (+) Length   218 a.a.
NCBI ID   WP_003245194.1    Uniprot ID   A0AAE2VF25
Organism   Bacillus subtilis strain O4     
Function   degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1225873..1236529
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ORF34_RS06360 (ORF34_06360) oppF 1226338..1227255 (+) 918 WP_003245567.1 oligopeptide ABC transporter ATP-binding protein OppF -
  ORF34_RS06365 (ORF34_06365) yjbB 1227362..1228579 (+) 1218 WP_010886478.1 MFS transporter -
  ORF34_RS06370 (ORF34_06370) yjbC 1228743..1229321 (+) 579 WP_003244921.1 GNAT family N-acetyltransferase -
  ORF34_RS06375 (ORF34_06375) spx 1229502..1229897 (+) 396 WP_003245483.1 transcriptional regulator Spx -
  ORF34_RS06380 (ORF34_06380) yjbE 1229940..1230596 (-) 657 WP_003232944.1 TerC family protein -
  ORF34_RS06385 (ORF34_06385) - 1230766..1230906 (+) 141 WP_119122854.1 hypothetical protein -
  ORF34_RS06390 (ORF34_06390) mecA 1230873..1231529 (+) 657 WP_003245194.1 adaptor protein MecA Regulator
  ORF34_RS06395 (ORF34_06395) - 1231524..1231646 (-) 123 WP_003245684.1 hypothetical protein -
  ORF34_RS06400 (ORF34_06400) coiA 1231690..1232841 (+) 1152 WP_003245839.1 competence protein CoiA Machinery gene
  ORF34_RS06405 (ORF34_06405) pepF 1233071..1234900 (+) 1830 WP_003245178.1 oligoendopeptidase F -
  ORF34_RS06410 (ORF34_06410) - 1234938..1235105 (-) 168 WP_003244944.1 hypothetical protein -
  ORF34_RS06415 (ORF34_06415) spxH 1235419..1236318 (-) 900 WP_003245184.1 protease adaptor protein SpxH -

Sequence

Protein


Download         Length: 218 a.a.        Molecular weight: 25763.69 Da        Isoelectric Point: 4.1174

>NTDB_id=758567 ORF34_RS06390 WP_003245194.1 1230873..1231529(+) (mecA) [Bacillus subtilis strain O4]
MEIERINEHTVKFYMSYGDIEDRGFDREEIWYNRERSEELFWEVMDEVHEEEEFAVEGPLWIQVQALDKGLEIIVTKAQL
SKDGQKLELPIPEDKKQEPASEDLDALLDDFQKEEQAVNQEEKEQKLQFVLRFGDFEDVISLSKLNVNGSKTTLYSFENR
YYLYVDFCNMTDEEVENQLSILLEYATESSISIHRLEEYGKLIISEHALETIKKHFAS

Nucleotide


Download         Length: 657 bp        

>NTDB_id=758567 ORF34_RS06390 WP_003245194.1 1230873..1231529(+) (mecA) [Bacillus subtilis strain O4]
ATGGAAATTGAAAGAATTAACGAGCATACAGTAAAATTTTATATGTCTTACGGAGATATTGAAGATCGCGGTTTTGACAG
AGAAGAAATTTGGTATAACCGTGAGCGCAGTGAAGAACTTTTCTGGGAAGTCATGGATGAAGTTCATGAAGAAGAGGAAT
TCGCTGTGGAAGGCCCACTTTGGATTCAAGTTCAGGCACTGGACAAAGGATTAGAAATCATCGTCACAAAAGCCCAGCTT
TCCAAAGACGGACAAAAGCTCGAACTGCCGATTCCTGAGGATAAAAAGCAAGAACCAGCATCTGAGGATCTTGACGCCTT
GCTGGATGATTTCCAGAAAGAAGAGCAAGCCGTCAATCAGGAAGAGAAGGAGCAAAAGCTTCAATTTGTCTTGCGATTTG
GCGATTTTGAGGATGTTATTTCTCTATCTAAATTGAACGTTAACGGAAGCAAAACGACTTTATATTCGTTTGAGAACCGA
TATTATTTATATGTAGATTTTTGCAATATGACTGATGAAGAGGTTGAAAATCAGCTAAGCATCCTGCTGGAGTACGCAAC
TGAATCCTCAATCAGCATACACCGTCTTGAAGAGTACGGCAAGCTGATTATTTCAGAGCATGCTCTAGAAACGATAAAAA
AACACTTTGCATCATAG

Domains

Predicted by InterproScan.

Negative regulator of genetic competence (MecA) (MecA)

(1-212)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mecA Bacillus subtilis subsp. subtilis str. 168

100

100

1