Detailed information NTG0075643

Bioinformatically predicted

Overview

• Name: ruvB
• Type: Machinery gene
• Locus tag: OCUAc18_RS14270
• Genome accession: NZ_AP024802
• Coordinates: 2945805..2946809 (+)
• Length: 334 a.a.
• NCBI ID: WP_001154002.1
• Uniprot ID: A3M7W1
• Organism: Acinetobacter baumannii strain OCU Ac18
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2940805..2951809

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OCUAc18_RS14260 (OCUAc18_28050)	-	2943765..2945105 (+)	1341	WP_000437078.1	deoxyguanosinetriphosphate triphosphohydrolase	-
OCUAc18_RS14265 (OCUAc18_28060)	ruvA	2945197..2945796 (+)	600	WP_000578666.1	Holliday junction branch migration protein RuvA	-
OCUAc18_RS14270 (OCUAc18_28070)	ruvB	2945805..2946809 (+)	1005	WP_001154002.1	Holliday junction branch migration DNA helicase RuvB	Machinery gene
OCUAc18_RS14275 (OCUAc18_28090)	-	2947014..2948350 (+)	1337	Protein_2809	M20 family metallopeptidase	-
OCUAc18_RS14280 (OCUAc18_28100)	ybgC	2948561..2948968 (+)	408	WP_001273591.1	tol-pal system-associated acyl-CoA thioesterase	-
OCUAc18_RS14285 (OCUAc18_28110)	tolQ	2948991..2949689 (+)	699	WP_221255334.1	protein TolQ	-
OCUAc18_RS14290 (OCUAc18_28120)	tolR	2949689..2950141 (+)	453	WP_001007562.1	protein TolR	-
OCUAc18_RS14295 (OCUAc18_28130)	tolA	2950145..2951560 (+)	1416	WP_221255335.1	cell envelope integrity protein TolA	-

Sequence

Protein

• Length: 334 a.a.
• Molecular weight: 36815.05 Da
• Isoelectric Point: 4.7936

>NTDB_id=75643 OCUAc18_RS14270 WP_001154002.1 2945805..2946809(+) (ruvB) [Acinetobacter baumannii strain OCU Ac18]
MQDRLISGTEKPEDHFDRAIRPTSLADYIGQPVVREQMEIFIGAARGRGEALDHTLIFGPPGLGKTTLANIIAREMGGNL
KSTSGPVLERAGDLAAMLTNLEEGDVLFIDEIHRLSPVIEEILYPAMEDYQLDIMIGEGPAARSIKLDLPPFTLVAATTR
AGLLTSPLRDRFGIVQRLEFYSVEDLTHIVSRSANLMDVPITVEGAEEVARRSRGTPRIANRLLRRVRDYAQVKGTGEVN
HEMAQRALDMLNVDKAGLDTLDRRYLSMLLERFDGGPAGVEALAAAMAEDSGTLEDVIEPYLIQQGYVMRTARGRIATNQ
SYLQFGMTPPEPKN

Nucleotide

• Length: 1005 bp

>NTDB_id=75643 OCUAc18_RS14270 WP_001154002.1 2945805..2946809(+) (ruvB) [Acinetobacter baumannii strain OCU Ac18]
ATGCAAGACCGTCTAATCAGTGGAACAGAAAAACCTGAAGATCATTTTGATCGGGCTATTCGACCGACTTCACTTGCCGA
TTATATCGGGCAACCAGTCGTACGCGAGCAAATGGAAATTTTCATCGGTGCGGCTCGTGGTCGTGGTGAAGCACTCGATC
ACACACTGATTTTCGGTCCACCGGGCTTAGGAAAAACCACGCTTGCCAATATTATTGCGCGTGAAATGGGTGGCAATCTC
AAATCCACTTCAGGGCCTGTTTTAGAGCGTGCGGGTGATTTGGCTGCAATGCTGACTAACCTTGAAGAAGGCGATGTTTT
ATTTATTGATGAAATTCACCGTCTTTCACCAGTGATCGAAGAAATTCTGTATCCGGCAATGGAAGATTACCAACTTGATA
TCATGATTGGTGAAGGTCCTGCTGCTCGTTCAATTAAACTCGATTTACCACCTTTTACGCTCGTTGCTGCGACCACACGT
GCCGGCTTACTCACCTCGCCTCTACGTGACCGTTTCGGTATTGTGCAACGTCTTGAATTCTATTCTGTAGAAGACCTAAC
TCACATCGTGTCACGATCTGCAAACCTCATGGATGTACCCATTACAGTTGAGGGTGCAGAAGAAGTTGCACGCCGTTCAC
GCGGAACACCGCGTATTGCCAATCGTTTATTACGCCGTGTACGTGACTATGCACAAGTAAAAGGTACAGGCGAAGTTAAC
CATGAAATGGCACAACGTGCGCTTGATATGCTCAATGTCGATAAAGCTGGTTTAGATACCTTAGACCGACGTTATTTAAG
TATGCTGTTAGAACGTTTTGATGGTGGACCTGCTGGTGTTGAAGCCCTTGCAGCTGCTATGGCTGAAGATAGCGGAACAC
TTGAAGATGTTATTGAACCTTATTTAATTCAGCAAGGTTATGTTATGCGTACTGCACGAGGTCGCATTGCAACCAACCAA
TCTTATTTACAGTTTGGCATGACGCCACCTGAGCCTAAAAACTAA

Domains

Predicted by InterProScan.

• Holliday junction DNA helicase RuvB P-loop domain (RuvB_N) (20-178)

• RuvB C-terminal winged helix domain (WHD_RuvB) (256-322)

• RuvB AAA lid domain (AAA_lid_4) (181-254)

3D structure

• AlphaFold DB: A3M7W1

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ruvB	Bacillus subtilis subsp. subtilis str. 168	57.704	99.102	0.572
ruvB	Synechocystis sp. PCC 6803	57.325	94.012	0.539
ruvB	Streptococcus pneumoniae TIGR4	56.113	95.509	0.536
ruvB	Streptococcus pneumoniae R6	56.113	95.509	0.536
ruvB	Streptococcus pneumoniae D39	56.113	95.509	0.536
ruvB	Helicobacter pylori 26695	54.934	91.018	0.5