Detailed information NTG0755454

Bioinformatically predicted

Overview

• Name: pilM
• Type: Machinery gene
• Locus tag: OOT55_RS11430
• Genome accession: NZ_CP110629
• Coordinates: 2634902..2635969 (-)
• Length: 355 a.a.
• NCBI ID: WP_322113808.1
• Uniprot ID: -
• Organism: Marinimicrobium sp. C6131
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2629902..2640969

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OOT55_RS11405 (OOT55_11405)	aroK	2630487..2630999 (-)	513	WP_265365996.1	shikimate kinase AroK	-
OOT55_RS11410 (OOT55_11410)	pilQ	2631003..2633138 (-)	2136	WP_265365997.1	type IV pilus secretin PilQ family protein	Machinery gene
OOT55_RS11415 (OOT55_11415)	-	2633175..2633708 (-)	534	WP_265365998.1	pilus assembly protein PilP	-
OOT55_RS11420 (OOT55_11420)	-	2633701..2634324 (-)	624	WP_265365999.1	type 4a pilus biogenesis protein PilO	-
OOT55_RS11425 (OOT55_11425)	-	2634327..2634902 (-)	576	WP_265366000.1	PilN domain-containing protein	-
OOT55_RS11430 (OOT55_11430)	pilM	2634902..2635969 (-)	1068	WP_322113808.1	pilus assembly protein PilM	Machinery gene
OOT55_RS11435 (OOT55_11435)	-	2636124..2638634 (+)	2511	WP_265366001.1	penicillin-binding protein 1A	-
OOT55_RS11440 (OOT55_11440)	-	2638675..2639361 (-)	687	WP_265366002.1	thermonuclease family protein	-
OOT55_RS11445 (OOT55_11445)	rpmE	2639537..2639752 (-)	216	WP_123638371.1	50S ribosomal protein L31	-

Sequence

Protein

• Length: 355 a.a.
• Molecular weight: 38569.99 Da
• Isoelectric Point: 4.2788

>NTDB_id=755454 OOT55_RS11430 WP_322113808.1 2634902..2635969(-) (pilM) [Marinimicrobium sp. C6131]
MGILSFLEKRAKPVLGLDISSTSVKLLELSRHGDRYRVETYAVRPLPPGAVVEKNINDPEAVADVVRTVVKQSKTKLKHA
AVAVAGSAVITKMIDMPAGLSDDAMETQISIEADQYIPFPLEEVAIDFEVQGESPRNPEQVEVLLAACRRENIDLRVNVL
QLADLQEEVVDVEAYSMERAFSLVAEQLEDQDGQVVAVIDIGATMTTLSVLVDGRTVYTREQLFGGKQLTEEIQRRYGLS
MEEAGLAKKQGGLPDDYESEVLGPFKEAVVQQVTRSLQFFFSASQYNDVDYIVLAGGVASMEGLVGLIEEKLGTQTLVAN
PFANMSVSSKVNAVALANDAPSMMIAAGLALRSFD

Nucleotide

• Length: 1068 bp

>NTDB_id=755454 OOT55_RS11430 WP_322113808.1 2634902..2635969(-) (pilM) [Marinimicrobium sp. C6131]
ATGGGCATTCTAAGCTTCCTGGAAAAAAGGGCGAAGCCGGTCTTGGGGTTGGACATCAGTTCAACGTCGGTCAAGCTTCT
GGAGCTCAGCCGACACGGTGACCGCTACCGGGTGGAGACCTATGCCGTACGCCCGCTGCCCCCCGGGGCGGTGGTCGAGA
AAAACATCAACGATCCCGAAGCGGTCGCGGATGTGGTCCGAACGGTGGTCAAGCAATCCAAAACCAAGCTCAAGCACGCG
GCCGTGGCGGTTGCCGGCTCTGCTGTGATCACCAAAATGATCGACATGCCGGCGGGGCTCAGCGACGACGCCATGGAGAC
TCAGATCTCTATAGAGGCCGATCAATACATTCCGTTCCCTCTGGAGGAAGTCGCCATCGATTTCGAGGTGCAGGGCGAAT
CGCCCCGTAACCCCGAGCAGGTGGAAGTGTTGTTGGCGGCTTGTCGGCGGGAAAACATCGATCTACGGGTCAATGTCCTG
CAATTGGCGGATCTTCAGGAGGAAGTGGTCGATGTGGAGGCCTACTCGATGGAGCGGGCCTTCAGCCTGGTGGCGGAACA
GTTGGAAGATCAGGATGGCCAGGTGGTCGCGGTCATTGATATCGGCGCCACCATGACCACTCTGAGCGTGCTTGTCGATG
GACGCACCGTTTACACCCGGGAGCAACTGTTCGGGGGCAAACAACTGACGGAAGAAATCCAGCGCCGGTACGGCCTGTCA
ATGGAAGAAGCCGGGTTGGCCAAGAAGCAGGGTGGCCTGCCGGATGATTACGAGTCAGAAGTGCTGGGTCCCTTCAAGGA
AGCCGTGGTCCAGCAGGTAACCCGCTCATTGCAGTTTTTCTTTTCCGCCAGCCAGTACAACGATGTGGACTACATCGTGC
TCGCTGGTGGTGTCGCGTCCATGGAGGGGCTGGTCGGGCTGATTGAAGAAAAGCTCGGTACCCAAACTCTGGTGGCCAAC
CCCTTTGCCAATATGTCGGTGTCCTCGAAAGTGAACGCGGTCGCGTTGGCCAATGATGCCCCCTCGATGATGATCGCGGC
CGGCCTGGCGCTGAGGAGTTTCGACTGA

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (16-354)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilM	Acinetobacter baumannii D1279779	55.241	99.437	0.549
comM	Acinetobacter nosocomialis M2	54.958	99.437	0.546
comM	Acinetobacter baylyi ADP1	53.258	99.437	0.53
pilM	Legionella pneumophila strain ERS1305867	44.225	100	0.442