Detailed information NTG0751077

Bioinformatically predicted

Overview

• Name: comGF/cglF
• Type: Machinery gene
• Locus tag: OHM48_RS00745
• Genome accession: NZ_CP109942
• Coordinates: 116584..117018 (+)
• Length: 144 a.a.
• NCBI ID: WP_063725150.1
• Uniprot ID: -
• Organism: Streptococcus suis strain ID35541
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 111584..122018

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OHM48_RS00710 (OHM48_00710)	-	112326..112691 (+)	366	WP_024417409.1	DUF1033 family protein	-
OHM48_RS00715 (OHM48_00715)	-	112726..113676 (-)	951	WP_024417410.1	S66 peptidase family protein	-
OHM48_RS00720 (OHM48_00720)	comYA	113762..114712 (+)	951	WP_024417411.1	competence type IV pilus ATPase ComGA	Machinery gene
OHM48_RS00725 (OHM48_00725)	comYB	114624..115661 (+)	1038	WP_264490838.1	competence type IV pilus assembly protein ComGB	Machinery gene
OHM48_RS00730 (OHM48_00730)	comYC	115663..115944 (+)	282	WP_009909092.1	competence type IV pilus major pilin ComGC	Machinery gene
OHM48_RS00735 (OHM48_00735)	comGD	115925..116332 (+)	408	WP_024387070.1	competence type IV pilus minor pilin ComGD	-
OHM48_RS00740 (OHM48_00740)	comYE	116304..116597 (+)	294	WP_024390433.1	competence type IV pilus minor pilin ComGE	Machinery gene
OHM48_RS00745 (OHM48_00745)	comGF/cglF	116584..117018 (+)	435	WP_063725150.1	competence type IV pilus minor pilin ComGF	Machinery gene
OHM48_RS00750 (OHM48_00750)	comGG	116996..117406 (+)	411	WP_009909099.1	competence type IV pilus minor pilin ComGG	-
OHM48_RS00755 (OHM48_00755)	comYH	117463..118416 (+)	954	WP_024409299.1	class I SAM-dependent methyltransferase	Machinery gene
OHM48_RS00760 (OHM48_00760)	-	118466..119653 (+)	1188	WP_014637319.1	acetate kinase	-
OHM48_RS00765 (OHM48_00765)	-	119968..120519 (+)	552	WP_024417413.1	folate family ECF transporter S component	-
OHM48_RS00770 (OHM48_00770)	-	120575..121831 (+)	1257	WP_024417414.1	folylpolyglutamate synthase/dihydrofolate synthase family protein	-

Sequence

Protein

• Length: 144 a.a.
• Molecular weight: 16420.77 Da
• Isoelectric Point: 6.9834

>NTDB_id=751077 OHM48_RS00745 WP_063725150.1 116584..117018(+) (comGF/cglF) [Streptococcus suis strain ID35541]
MLKSKIPAFTLLECLVALVILSGSLLVFEGLSKLLVQEAHYQGQTVQKEWLVFSSQLRSEWDQAELVKVENGKVYVDKDG
QALAFGKSRSDDFRKTNDRGQGYQPMLYQVDSAAISQEKQLVRIDFSFKNGEERTFIYAFKEKS

Nucleotide

• Length: 435 bp

>NTDB_id=751077 OHM48_RS00745 WP_063725150.1 116584..117018(+) (comGF/cglF) [Streptococcus suis strain ID35541]
TTGTTAAAAAGTAAAATTCCTGCTTTTACTCTCTTGGAATGCTTGGTAGCCTTAGTCATCCTTTCAGGTAGTCTTCTGGT
CTTTGAAGGCTTGTCAAAACTGCTGGTCCAAGAAGCGCATTATCAAGGTCAGACCGTTCAAAAGGAATGGTTGGTCTTCT
CTAGCCAATTGCGGTCGGAGTGGGACCAGGCTGAATTGGTCAAGGTTGAAAATGGCAAGGTCTATGTCGATAAGGATGGA
CAAGCATTAGCCTTTGGCAAGTCACGGTCGGATGATTTTCGGAAAACAAATGACAGGGGACAGGGTTACCAGCCCATGCT
CTATCAGGTGGATAGCGCAGCCATTTCCCAAGAAAAGCAGCTGGTGCGCATCGACTTTAGCTTTAAAAACGGAGAGGAGC
GGACCTTTATCTATGCTTTTAAAGAAAAAAGTTAA

Domains

Predicted by InterproScan.

• Putative Competence protein ComGF (ComGF) (37-134)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGF/cglF	Streptococcus pneumoniae TIGR4	53.901	97.917	0.528
comGF/cglF	Streptococcus pneumoniae Rx1	53.901	97.917	0.528
comGF/cglF	Streptococcus pneumoniae D39	53.901	97.917	0.528
comGF/cglF	Streptococcus pneumoniae R6	53.901	97.917	0.528
comGF/cglF	Streptococcus mitis NCTC 12261	54.478	93.056	0.507
comYF	Streptococcus mutans UA140	50	100	0.5
comYF	Streptococcus mutans UA159	49.306	100	0.493
comGF/cglF	Streptococcus mitis SK321	51.493	93.056	0.479
comGF	Lactococcus lactis subsp. cremoris KW2	47.518	97.917	0.465