Detailed information
Bioinformatically predicted
Overview
| Name | comEA | Type | Machinery gene |
| Locus tag | AXW80_RS18340 | Genome accession | NZ_CP109908 |
| Coordinates | 3879661..3879981 (-) | Length | 106 a.a. |
| NCBI ID | WP_005318073.1 | Uniprot ID | A4SJ96 |
| Organism | Aeromonas salmonicida subsp. salmonicida strain J227 | ||
| Function | dsDNA binding (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 3874661..3884981
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AXW80_RS18320 (AXW80_18270) | - | 3874989..3875687 (-) | 699 | WP_005318084.1 | DnaT-like ssDNA-binding domain-containing protein | - |
| AXW80_RS18325 (AXW80_18275) | - | 3876041..3877012 (+) | 972 | WP_011898383.1 | response regulator | - |
| AXW80_RS18330 (AXW80_18280) | - | 3877044..3878441 (-) | 1398 | WP_011898384.1 | peptide MFS transporter | - |
| AXW80_RS18335 (AXW80_18285) | galU | 3878655..3879566 (-) | 912 | WP_005318075.1 | UTP--glucose-1-phosphate uridylyltransferase GalU | - |
| AXW80_RS18340 (AXW80_18290) | comEA | 3879661..3879981 (-) | 321 | WP_005318073.1 | ComEA family DNA-binding protein | Machinery gene |
| AXW80_RS18345 (AXW80_18295) | cysQ | 3880149..3880919 (+) | 771 | WP_005318069.1 | 3'(2'),5'-bisphosphate nucleotidase CysQ | - |
| AXW80_RS18350 (AXW80_18300) | - | 3881001..3881297 (-) | 297 | WP_005318066.1 | YciI family protein | - |
| AXW80_RS18355 (AXW80_18305) | - | 3881324..3881875 (-) | 552 | WP_005318063.1 | septation protein A | - |
| AXW80_RS18360 (AXW80_18310) | - | 3881961..3883496 (-) | 1536 | WP_005318060.1 | pyridoxal-dependent decarboxylase | - |
| AXW80_RS18365 (AXW80_18315) | - | 3883721..3884356 (+) | 636 | WP_005318058.1 | hemolysin III family protein | - |
Sequence
Protein
Download Length: 106 a.a. Molecular weight: 11222.15 Da Isoelectric Point: 10.0215
>NTDB_id=750560 AXW80_RS18340 WP_005318073.1 3879661..3879981(-) (comEA) [Aeromonas salmonicida subsp. salmonicida strain J227]
MNYKILTATLLLSCLPLLSQPLLAADKPAAKPATTVTTAKESGKVNLNTASINELTALKGIGEKKAQAIVDFRQKQGKFT
TVEQLADVSGIGPATLEANRDMIIVK
MNYKILTATLLLSCLPLLSQPLLAADKPAAKPATTVTTAKESGKVNLNTASINELTALKGIGEKKAQAIVDFRQKQGKFT
TVEQLADVSGIGPATLEANRDMIIVK
Nucleotide
Download Length: 321 bp
>NTDB_id=750560 AXW80_RS18340 WP_005318073.1 3879661..3879981(-) (comEA) [Aeromonas salmonicida subsp. salmonicida strain J227]
ATGAACTACAAAATCCTGACCGCCACCCTGCTGCTGAGCTGCCTGCCCCTGCTCAGCCAGCCTTTGCTGGCCGCCGACAA
GCCGGCTGCCAAGCCAGCGACCACGGTCACCACCGCCAAGGAGAGTGGCAAGGTGAACCTGAATACGGCCAGTATCAATG
AGTTAACTGCCCTCAAGGGGATCGGAGAGAAGAAGGCGCAGGCCATCGTCGATTTTCGTCAGAAACAGGGCAAGTTCACC
ACGGTTGAACAACTGGCGGATGTCAGCGGCATAGGGCCGGCCACTCTGGAAGCAAATCGGGACATGATCATCGTCAAATA
G
ATGAACTACAAAATCCTGACCGCCACCCTGCTGCTGAGCTGCCTGCCCCTGCTCAGCCAGCCTTTGCTGGCCGCCGACAA
GCCGGCTGCCAAGCCAGCGACCACGGTCACCACCGCCAAGGAGAGTGGCAAGGTGAACCTGAATACGGCCAGTATCAATG
AGTTAACTGCCCTCAAGGGGATCGGAGAGAAGAAGGCGCAGGCCATCGTCGATTTTCGTCAGAAACAGGGCAAGTTCACC
ACGGTTGAACAACTGGCGGATGTCAGCGGCATAGGGCCGGCCACTCTGGAAGCAAATCGGGACATGATCATCGTCAAATA
G
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comEA | Vibrio cholerae C6706 |
50 |
100 |
0.519 |
| comEA | Vibrio cholerae strain A1552 |
50 |
100 |
0.519 |
| comEA | Vibrio parahaemolyticus RIMD 2210633 |
46.392 |
91.509 |
0.425 |
| comE1/comEA | Haemophilus influenzae Rd KW20 |
42.453 |
100 |
0.425 |
| comEA/comE1 | Glaesserella parasuis strain SC1401 |
61.905 |
59.434 |
0.368 |