Detailed information NTG0749347

Bioinformatically predicted

Overview

• Name: ssbA
• Type: Machinery gene
• Locus tag: OKL56_RS09525
• Genome accession: NZ_CP109802
• Coordinates: 2034561..2035046 (-)
• Length: 161 a.a.
• NCBI ID: WP_240273691.1
• Uniprot ID: -
• Organism: Enterococcus hirae strain T16-1
• Function: ssDNA binding (predicted from homology) DNA processing

Genomic Context

Location: 2029561..2040046

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OKL56_RS09470 (OKL56_09470)	-	2029774..2029938 (-)	165	WP_264378765.1	hypothetical protein	-
OKL56_RS09475 (OKL56_09475)	-	2029995..2030549 (-)	555	WP_264378766.1	hypothetical protein	-
OKL56_RS09480 (OKL56_09480)	-	2030569..2031513 (-)	945	WP_130029530.1	Kiwa anti-phage protein KwaB-like domain-containing protein	-
OKL56_RS09485 (OKL56_09485)	-	2031908..2032321 (-)	414	WP_002290659.1	ArpU family phage packaging/lysis transcriptional regulator	-
OKL56_RS09490 (OKL56_09490)	-	2032398..2032694 (-)	297	WP_264378767.1	hypothetical protein	-
OKL56_RS09495 (OKL56_09495)	-	2032694..2032912 (-)	219	WP_123835073.1	hypothetical protein	-
OKL56_RS09500 (OKL56_09500)	-	2032913..2033236 (-)	324	WP_185072078.1	hypothetical protein	-
OKL56_RS09505 (OKL56_09505)	-	2033233..2033763 (-)	531	WP_264378768.1	DUF1642 domain-containing protein	-
OKL56_RS09510 (OKL56_09510)	-	2033760..2034077 (-)	318	WP_264378769.1	DUF1140 family protein	-
OKL56_RS09515 (OKL56_09515)	-	2034077..2034382 (-)	306	WP_240273692.1	hypothetical protein	-
OKL56_RS09520 (OKL56_09520)	-	2034379..2034540 (-)	162	WP_264378989.1	antitoxin	-
OKL56_RS09525 (OKL56_09525)	ssbA	2034561..2035046 (-)	486	WP_240273691.1	single-stranded DNA-binding protein	Machinery gene
OKL56_RS09530 (OKL56_09530)	-	2035047..2035382 (-)	336	WP_002346392.1	VRR-NUC domain-containing protein	-
OKL56_RS09535 (OKL56_09535)	-	2035379..2035567 (-)	189	WP_002346393.1	hypothetical protein	-
OKL56_RS09540 (OKL56_09540)	-	2035568..2036806 (-)	1239	WP_002346394.1	DnaB-like helicase C-terminal domain-containing protein	-
OKL56_RS09545 (OKL56_09545)	-	2036796..2037491 (-)	696	WP_231466079.1	helix-turn-helix domain-containing protein	-
OKL56_RS09550 (OKL56_09550)	-	2037495..2038181 (-)	687	WP_231466080.1	putative HNHc nuclease	-
OKL56_RS09555 (OKL56_09555)	-	2038187..2038858 (-)	672	WP_264378770.1	DUF1071 domain-containing protein	-
OKL56_RS09560 (OKL56_09560)	-	2038851..2039192 (-)	342	WP_264378771.1	hypothetical protein	-

Sequence

Protein

• Length: 161 a.a.
• Molecular weight: 17809.58 Da
• Isoelectric Point: 7.9972

>NTDB_id=749347 OKL56_RS09525 WP_240273691.1 2034561..2035046(-) (ssbA) [Enterococcus hirae strain T16-1]
MINTVTLVGRLTKDPELRTTTSGTGVATFTLAVNRDFKDANGNREADFINCVAWRKTAEILANYAKKGSLIGLIGRIQTR
SYENQQGNRVFVTEVVVERFNLLESRSNNDTGVSNNQTTNYKGNNQNSSNDLSHAQNNQSKNVNSNPFDGSSMNTDLELP
F

Nucleotide

• Length: 486 bp

>NTDB_id=749347 OKL56_RS09525 WP_240273691.1 2034561..2035046(-) (ssbA) [Enterococcus hirae strain T16-1]
ATGATTAATACAGTGACTTTAGTAGGAAGATTGACAAAAGACCCGGAGCTTAGAACCACAACAAGTGGAACAGGAGTAGC
GACTTTCACATTAGCAGTAAACCGTGACTTCAAAGATGCGAATGGAAATAGAGAAGCAGACTTTATCAATTGTGTAGCGT
GGAGAAAAACAGCTGAAATTTTAGCAAACTATGCGAAAAAAGGTTCGTTGATTGGATTGATTGGGCGTATTCAAACCAGA
AGCTATGAAAATCAACAAGGAAACCGAGTTTTTGTGACGGAAGTAGTCGTAGAACGCTTCAATCTACTTGAGAGCCGTTC
TAACAATGATACAGGCGTTTCGAACAATCAGACGACAAATTATAAAGGGAACAACCAAAACAGCTCTAACGACTTATCAC
ACGCTCAAAACAATCAATCAAAAAACGTTAATTCCAATCCGTTTGATGGTTCGTCAATGAATACTGATTTAGAACTTCCG
TTTTGA

Domains

Predicted by InterProScan.

• Single-strand binding protein family (SSB) (2-102)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ssbA	Bacillus subtilis subsp. subtilis str. 168	51.163	100	0.547
ssb	Latilactobacillus sakei subsp. sakei 23K	51.176	100	0.54
ssbB	Bacillus subtilis subsp. subtilis str. 168	58.491	65.839	0.385
ssbB/cilA	Streptococcus mitis NCTC 12261	54.206	66.46	0.36
ssbB/cilA	Streptococcus pneumoniae TIGR4	54.206	66.46	0.36