Detailed information NTG0748825

Bioinformatically predicted

Overview

• Name: pilM
• Type: Machinery gene
• Locus tag: OBG92_RS27725
• Genome accession: NZ_CP109657
• Coordinates: 5888677..5889741 (-)
• Length: 354 a.a.
• NCBI ID: WP_003110888.1
• Uniprot ID: -
• Organism: Pseudomonas aeruginosa strain Zw26
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 5883677..5894741

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OBG92_RS27700 (OBG92_05454)	aroK	5884212..5884730 (-)	519	WP_003148769.1	shikimate kinase AroK	-
OBG92_RS27705 (OBG92_05455)	pilQ	5884742..5886886 (-)	2145	WP_264315654.1	type 4a pilus secretin PilQ	Machinery gene
OBG92_RS27710 (OBG92_05456)	pilP	5886940..5887464 (-)	525	WP_034082521.1	type 4a pilus biogenesis lipoprotein PilP	-
OBG92_RS27715 (OBG92_05457)	pilO	5887461..5888084 (-)	624	WP_003148775.1	type 4a pilus biogenesis protein PilO	-
OBG92_RS27720 (OBG92_05458)	pilN	5888081..5888677 (-)	597	WP_003148777.1	type 4a pilus biogenesis protein PilN	-
OBG92_RS27725 (OBG92_05459)	pilM	5888677..5889741 (-)	1065	WP_003110888.1	type IV pilus assembly protein PilM	Machinery gene
OBG92_RS27730 (OBG92_05460)	-	5889926..5892397 (+)	2472	WP_012077723.1	penicillin-binding protein 1A	-
OBG92_RS27735 (OBG92_05461)	-	5892502..5893770 (-)	1269	WP_003148779.1	malic enzyme-like NAD(P)-binding protein	-

Sequence

Protein

• Length: 354 a.a.
• Molecular weight: 37983.48 Da
• Isoelectric Point: 4.5405

>NTDB_id=748825 OBG92_RS27725 WP_003110888.1 5888677..5889741(-) (pilM) [Pseudomonas aeruginosa strain Zw26]
MLGLIKKKANTLLGIDISSTSVKLLELSRSGGRYKVEAYAVEPLPPNAVVEKNIVELEGVGQALSRVLVKAKTNLKSAVV
AVAGSAVITKTIEMEAGLSEDELENQLKIEADQYIPYPLEEVAIDFEVQGLSARNPERVDVLLAACRKENVEVREAALAL
AGLTAKVVDVEAYALERSYALLSSQLGADTDQLTVAVVDIGATMTTLSVLHNGRTIYTREQLFGGRQLTEEIQRRYGLSV
EEAGLAKKQGGLPDDYDSEVLRPFKDAVVQQVSRSLQFFFAAGQFNDVDYIVLAGGTASIQDLDRLIQQKIGTPTLVANP
FADMALNGKVNAGALASDAPALMIACGLALRSFD

Nucleotide

• Length: 1065 bp

>NTDB_id=748825 OBG92_RS27725 WP_003110888.1 5888677..5889741(-) (pilM) [Pseudomonas aeruginosa strain Zw26]
GTGCTAGGGCTCATAAAAAAGAAAGCGAATACCTTACTGGGGATCGACATCAGCTCGACCTCGGTAAAGCTCCTTGAGTT
GAGCCGCTCCGGAGGCCGCTACAAAGTGGAGGCCTATGCCGTCGAGCCGCTTCCGCCGAACGCAGTCGTGGAAAAGAACA
TCGTCGAGCTGGAAGGGGTCGGCCAGGCGTTGTCACGGGTGCTGGTCAAGGCGAAAACCAACCTGAAATCGGCCGTGGTG
GCCGTCGCCGGTTCGGCGGTGATCACCAAGACGATCGAGATGGAGGCCGGGCTTTCCGAGGACGAACTGGAAAACCAGCT
GAAGATCGAGGCCGACCAGTACATCCCCTATCCGCTGGAGGAGGTCGCCATCGACTTCGAGGTCCAGGGTCTTTCCGCGC
GCAATCCCGAGCGCGTGGACGTGCTCCTGGCCGCCTGTCGGAAAGAGAACGTCGAGGTGCGCGAAGCGGCCCTGGCGCTG
GCCGGCCTGACCGCCAAGGTGGTCGACGTCGAGGCCTACGCGCTGGAGCGTTCCTATGCGCTGCTGAGCAGTCAGTTGGG
TGCCGACACCGACCAGTTGACCGTGGCGGTGGTGGACATCGGCGCGACCATGACCACGCTCAGCGTCCTGCACAACGGCC
GCACCATCTATACCCGCGAGCAGTTGTTCGGCGGACGCCAGCTCACCGAGGAGATCCAGCGGCGCTACGGGCTTTCGGTG
GAGGAAGCCGGTCTCGCCAAGAAGCAGGGTGGTCTTCCGGATGACTACGACAGCGAAGTCCTGCGTCCGTTCAAGGACGC
CGTGGTCCAGCAGGTTTCCCGTTCGCTGCAGTTCTTCTTCGCCGCCGGCCAGTTCAATGACGTCGACTACATCGTCCTGG
CGGGCGGCACGGCGTCGATCCAGGACCTCGACCGGCTGATTCAGCAGAAGATCGGCACCCCGACCCTGGTCGCCAACCCG
TTCGCCGACATGGCGCTGAACGGCAAGGTGAACGCCGGCGCCCTGGCCAGCGACGCGCCGGCGTTGATGATCGCCTGCGG
CCTGGCGTTGAGGAGTTTCGACTGA

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (14-353)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilM	Acinetobacter baumannii D1279779	55.899	100	0.562
comM	Acinetobacter nosocomialis M2	55.899	100	0.562
comM	Acinetobacter baylyi ADP1	51.977	100	0.52
pilM	Legionella pneumophila strain ERS1305867	46.61	100	0.466