Detailed information NTG0074379

Bioinformatically predicted

Overview

• Name: ruvA
• Type: Machinery gene
• Locus tag: K6K02_RS14775
• Genome accession: NZ_AP024626
• Coordinates: 2802006..2802611 (-)
• Length: 201 a.a.
• NCBI ID: WP_003229717.1
• Uniprot ID: O05392
• Organism: Bacillus subtilis strain BEST3125
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2797006..2807611

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
K6K02_RS14745 (BsBEST3125_28350)	-	2797819..2798208 (+)	390	WP_004398667.1	TIGR04086 family membrane protein	-
K6K02_RS14750 (BsBEST3125_28360)	yajC	2798265..2798531 (-)	267	WP_004398708.1	preprotein translocase subunit YajC	-
K6K02_RS14755 (BsBEST3125_28370)	tgt	2798568..2799713 (-)	1146	WP_003229725.1	tRNA guanosine(34) transglycosylase Tgt	-
K6K02_RS14760 (BsBEST3125_28380)	queA	2799740..2800768 (-)	1029	WP_003229723.1	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	-
K6K02_RS14765 (BsBEST3125_28390)	yrzS	2800798..2800998 (-)	201	WP_003222669.1	DUF2905 domain-containing protein	-
K6K02_RS14770 (BsBEST3125_28400)	ruvB	2800991..2801995 (-)	1005	WP_003229718.1	Holliday junction branch migration DNA helicase RuvB	Machinery gene
K6K02_RS14775 (BsBEST3125_28410)	ruvA	2802006..2802611 (-)	606	WP_003229717.1	Holliday junction branch migration protein RuvA	Machinery gene
K6K02_RS14780 (BsBEST3125_28420)	bofC	2802750..2803262 (-)	513	WP_003229715.1	sporulation cell-cell signaling protein BofC	-
K6K02_RS14785 (BsBEST3125_28430)	csbX	2803310..2804617 (-)	1308	WP_003246197.1	MFS transporter	-
K6K02_RS14790 (BsBEST3125_28440)	iolG	2804688..2805713 (-)	1026	WP_004398990.1	inositol 2-dehydrogenase	-
K6K02_RS14795 (BsBEST3125_28450)	yrzF	2805951..2806598 (+)	648	WP_003246159.1	phosphotransferase	-
K6K02_RS14800 (BsBEST3125_28460)	-	2806644..2806766 (-)	123	WP_003229707.1	hypothetical protein	-
K6K02_RS14805 (BsBEST3125_28470)	-	2806746..2807141 (+)	396	WP_220096631.1	DUF5412 family protein	-
K6K02_RS14810	-	2807148..2807288 (+)	141	WP_004398683.1	hypothetical protein	-

Sequence

Protein

• Length: 201 a.a.
• Molecular weight: 22584.08 Da
• Isoelectric Point: 5.4072

>NTDB_id=74379 K6K02_RS14775 WP_003229717.1 2802006..2802611(-) (ruvA) [Bacillus subtilis strain BEST3125]
MIEFVKGTIDYVSPQYIVIENGGIGYQIFTPNPFIYKERSQETIFTYHHIREDAFSLYGFSTREEKALFTKLLNVTGIGP
KGALAILGSGDPGAVIQAIENEDEAFLVKFPGVGKKTARQIILDLKGKLADVVPEMIENLFNHEERLEKQTAETALEEAL
EALRVLGYAEKEIKKVLPHLKEEIGLTTDQYVKKALQKLLK

Nucleotide

• Length: 606 bp

>NTDB_id=74379 K6K02_RS14775 WP_003229717.1 2802006..2802611(-) (ruvA) [Bacillus subtilis strain BEST3125]
GTGATTGAATTTGTTAAAGGGACGATTGATTATGTATCTCCCCAATATATTGTCATAGAGAACGGCGGCATCGGCTATCA
GATTTTCACGCCGAATCCGTTTATATATAAGGAGAGAAGCCAAGAAACGATTTTTACATACCATCATATCAGAGAGGATG
CTTTTTCGCTTTATGGTTTTTCAACAAGAGAGGAGAAGGCGCTCTTTACAAAGCTGTTAAACGTGACCGGAATTGGCCCG
AAAGGAGCACTTGCCATCTTGGGCTCGGGTGATCCCGGAGCGGTCATCCAAGCAATTGAAAATGAAGATGAAGCTTTTTT
GGTCAAGTTTCCTGGAGTAGGAAAGAAAACCGCACGCCAGATTATTCTAGATTTAAAAGGAAAGCTGGCAGATGTTGTGC
CTGAAATGATTGAAAATCTGTTTAATCATGAAGAAAGGCTTGAAAAGCAAACAGCGGAAACGGCTCTTGAAGAAGCACTT
GAAGCCCTCAGGGTTCTCGGATATGCTGAAAAAGAAATCAAAAAGGTGCTTCCTCACCTTAAAGAAGAAATTGGGCTGAC
AACAGACCAATATGTGAAAAAAGCATTACAAAAACTATTAAAGTAA

Domains

Predicted by InterProScan.

• RuvA, C-terminal domain (RuvA_C) (155-199)

• RuvA N terminal domain (RuvA_N) (1-59)

• Helix-hairpin-helix domain (HHH_5) (69-126)

3D structure

• AlphaFold DB: O05392

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ruvA	Bacillus subtilis subsp. subtilis str. 168	100	100	1
ruvA	Streptococcus pneumoniae TIGR4	39.806	100	0.408
ruvA	Streptococcus pneumoniae R6	39.806	100	0.408
ruvA	Streptococcus pneumoniae D39	39.806	100	0.408