Detailed information NTG0741596

Bioinformatically predicted

Overview

• Name: comM
• Type: Machinery gene
• Locus tag: OF401_RS19985
• Genome accession: NZ_CP107717
• Coordinates: 4608230..4609750 (+)
• Length: 506 a.a.
• NCBI ID: WP_040941986.1
• Uniprot ID: -
• Organism: Xanthomonas campestris pv. campestris strain XY1-1
• Function: ssDNA binding (predicted from homology) DNA processing

Genomic Context

Location: 4603230..4614750

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OF401_RS19960 (OF401_19960)	speE	4604162..4605019 (+)	858	WP_011038944.1	polyamine aminopropyltransferase	-
OF401_RS19965 (OF401_19965)	-	4605134..4605916 (-)	783	WP_057673499.1	hypothetical protein	-
OF401_RS19970 (OF401_19970)	-	4606454..4607113 (+)	660	WP_057673501.1	RIO1 family regulatory kinase/ATPase	-
OF401_RS19975 (OF401_19975)	-	4607413..4607787 (-)	375	WP_029217016.1	P-II family nitrogen regulator	-
OF401_RS19980 (OF401_19980)	-	4607942..4608214 (+)	273	WP_040941985.1	accessory factor UbiK family protein	-
OF401_RS19985 (OF401_19985)	comM	4608230..4609750 (+)	1521	WP_040941986.1	YifB family Mg chelatase-like AAA ATPase	Machinery gene
OF401_RS19990 (OF401_19990)	-	4610107..4610616 (+)	510	WP_057673502.1	lipocalin family protein	-
OF401_RS19995 (OF401_19995)	-	4610627..4610803 (-)	177	WP_012439469.1	hypothetical protein	-
OF401_RS20000 (OF401_20000)	-	4611185..4612744 (+)	1560	WP_050911777.1	EAL domain-containing protein	-
OF401_RS20005 (OF401_20005)	-	4613215..4613385 (-)	171	WP_154727132.1	hypothetical protein	-
OF401_RS20010 (OF401_20010)	-	4613399..4614520 (-)	1122	WP_011038953.1	acyl-CoA desaturase	-

Sequence

Protein

• Length: 506 a.a.
• Molecular weight: 53881.58 Da
• Isoelectric Point: 8.3405

>NTDB_id=741596 OF401_RS19985 WP_040941986.1 4608230..4609750(+) (comM) [Xanthomonas campestris pv. campestris strain XY1-1]
MSLALVHSRARVGVHAPEVRVEVHLSGGLPSTQIVGLPEAAVRESRERVRAALLCAQFEFPARRITINLAPADLPKDGGR
FDLPIALGILAASGQIDRQALADYEFLGELALTGELRGIDGVLPAALAAAQAGRRLIVPLANGAEAAIAGHVQAFTARTL
LEVCAALNGTQPPPPAELAIVALGARALPDMADVRGQPHARRALEIAAAGGHHLLLVGSPGCGKTLLASRLPSLLPDASE
AEALETAAITSISGRGLDLARWRQRPYRAPHHTASAVALVGGGTHPRPGEISLAHNGVLFLDELPEWQRQTLEVLREPLE
SGVVTISRAARSMDFPARFQLVAAMNPCPCGWAGDASGRCRCSGDAIRRYRSRISGPLLDRIDLHVDVPRLPPQALRSGA
TGEDSASVRARVAAARERQQARAQVPNARLDQAATDRHCRLGNDDQLLLERAIEHLQLSARSMHRILRVSRTIADLDDSA
DIATRHLTEAIGYRKLDRALDTSSAA

Nucleotide

• Length: 1521 bp

>NTDB_id=741596 OF401_RS19985 WP_040941986.1 4608230..4609750(+) (comM) [Xanthomonas campestris pv. campestris strain XY1-1]
ATGAGTCTGGCACTGGTGCACAGCCGTGCCCGCGTGGGAGTGCACGCGCCTGAAGTCCGGGTGGAAGTGCATCTCTCCGG
CGGCCTGCCTTCCACCCAGATCGTGGGCCTGCCCGAGGCCGCGGTGCGCGAGTCACGCGAACGGGTCCGTGCCGCCTTGC
TGTGCGCACAGTTCGAATTCCCCGCACGCCGCATCACCATCAACCTGGCGCCGGCGGATCTGCCCAAGGACGGCGGCCGC
TTCGACCTGCCGATCGCGCTCGGCATCCTTGCGGCCAGCGGGCAGATCGACCGCCAGGCCCTGGCCGACTACGAATTCCT
CGGCGAGCTGGCCCTCACCGGCGAGCTGCGCGGCATCGATGGGGTGCTGCCTGCGGCCCTGGCCGCCGCGCAGGCCGGGC
GGCGCCTGATCGTGCCGCTGGCCAACGGCGCCGAGGCGGCGATTGCCGGACACGTGCAAGCCTTTACCGCGCGCACCTTG
TTGGAAGTGTGCGCCGCACTTAACGGCACCCAGCCGCCACCGCCCGCCGAACTGGCGATCGTGGCGCTCGGCGCCCGCGC
GCTACCGGACATGGCCGACGTGCGCGGGCAACCGCATGCGCGCCGGGCGCTGGAGATCGCCGCGGCCGGCGGCCATCACC
TGTTGCTGGTCGGCAGCCCTGGCTGCGGCAAGACCTTGCTGGCCTCGCGCCTGCCCAGTCTGTTGCCGGACGCCAGCGAG
GCCGAGGCGCTGGAAACCGCCGCCATCACCTCCATCAGCGGACGCGGCCTGGACCTGGCGCGCTGGCGGCAACGTCCTTA
TCGCGCCCCGCACCATACCGCCAGCGCGGTGGCGCTGGTGGGCGGTGGCACCCATCCGCGCCCGGGTGAGATCTCATTGG
CGCACAACGGGGTACTGTTCCTGGACGAGCTACCCGAATGGCAGCGGCAGACCCTGGAAGTGCTGCGCGAGCCACTGGAG
TCCGGCGTGGTCACCATCTCGCGGGCCGCGCGCAGCATGGACTTCCCGGCGCGGTTCCAGTTGGTCGCCGCAATGAATCC
CTGCCCGTGCGGCTGGGCCGGCGACGCCAGCGGGCGATGCCGCTGCAGTGGTGACGCCATCCGCCGGTATCGCAGCCGCA
TCTCCGGGCCGCTGCTGGATCGCATCGACCTGCACGTCGACGTGCCGCGCCTGCCGCCGCAGGCACTGCGCAGCGGTGCG
ACCGGCGAGGACAGTGCCAGCGTGCGTGCACGCGTTGCCGCCGCACGCGAACGCCAGCAGGCACGTGCACAGGTGCCCAA
TGCCCGCCTGGACCAGGCCGCCACTGACCGCCACTGCCGGTTGGGCAATGACGATCAGCTGCTGCTGGAACGCGCCATCG
AACATCTGCAGCTGTCCGCACGGTCGATGCACCGCATCCTGCGCGTTTCGCGCACCATCGCCGATCTCGACGACAGCGCC
GACATCGCCACCCGTCACCTCACCGAAGCCATCGGCTACCGCAAACTCGACCGCGCTCTCGATACCTCCAGCGCCGCATG
A

Domains

Predicted by InterproScan.

• Magnesium chelatase, subunit ChlI (Mg_chelatase) (190-394)

• Magnesium chelatase, subunit ChlI C-terminal (Mg_chelatase_C) (402-494)

• Subunit ChlI of Mg-chelatase (ChlI) (21-142)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comM	Vibrio cholerae strain A1552	55.336	100	0.553
comM	Haemophilus influenzae Rd KW20	54.118	100	0.545
comM	Vibrio campbellii strain DS40M4	53.711	100	0.543
comM	Glaesserella parasuis strain SC1401	53.953	100	0.54
comM	Legionella pneumophila str. Paris	53.187	99.209	0.528
comM	Legionella pneumophila strain ERS1305867	53.187	99.209	0.528
RA0C_RS07335	Riemerella anatipestifer ATCC 11845 = DSM 15868	46.047	100	0.46