Detailed information NTG0073981

Bioinformatically predicted

Overview

• Name: comM
• Type: Machinery gene
• Locus tag: K5607_RS11000
• Genome accession: NZ_AP019782
• Coordinates: 2519380..2520348 (+)
• Length: 322 a.a.
• NCBI ID: WP_221047030.1
• Uniprot ID: A0A8D4VPT1
• Organism: Methylogaea oryzae strain E10
• Function: ssDNA binding (predicted from homology) DNA processing

Genomic Context

Location: 2514380..2525348

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
K5607_RS10980 (MoryE10_21430)	-	2514621..2515913 (-)	1293	WP_221047028.1	alginate export family protein	-
K5607_RS10985 (MoryE10_21440)	-	2516047..2517177 (-)	1131	WP_054772942.1	glucose-6-phosphate dehydrogenase assembly protein OpcA	-
K5607_RS10990 (MoryE10_21450)	zwf	2517174..2518718 (-)	1545	WP_221047029.1	glucose-6-phosphate dehydrogenase	-
K5607_RS18255 (MoryE10_21460)	-	2518934..2519353 (+)	420	WP_343222897.1	accessory factor UbiK family protein	-
K5607_RS11000 (MoryE10_21470)	comM	2519380..2520348 (+)	969	WP_221047030.1	magnesium chelatase domain-containing protein	Machinery gene
K5607_RS11005 (MoryE10_21480)	-	2520356..2522155 (+)	1800	WP_054772941.1	hypothetical protein	-
K5607_RS11010 (MoryE10_21490)	-	2522215..2522673 (+)	459	WP_246598837.1	type II toxin-antitoxin system HicB family antitoxin	-
K5607_RS11015 (MoryE10_21500)	-	2522731..2523432 (+)	702	WP_082411373.1	thermonuclease family protein	-

Sequence

Protein

• Length: 322 a.a.
• Molecular weight: 33598.56 Da
• Isoelectric Point: 6.6855

>NTDB_id=73981 K5607_RS11000 WP_221047030.1 2519380..2520348(+) (comM) [Methylogaea oryzae strain E10]
MTLATVYSRGKQGIQAPLVTVEAHLSNGLPSLSIVGLPEAAVKESKDRVRSALLTCHFEFPAQRITINLAPADLPKEGGR
FDLAIAVTILAASGQIRQAELGRYELLGELSLSGELRPAKGALPVAVAARDCGRALILPGSNAAEAALAAGAEILAANHL
LEVCGHLNGEAPLPETPSDRPSAPPVFDVDLADVHGQYQAKRALEIAAAGRHNLLMLGPPGTGKSMLAARLPTLLPALSE
AEALETAAITSVSDLPLDPGRWLAPPYRAPHHTASAAALVGGGCQFSKLPRRFGNSCDNFVTTESYSPATPSLLAQGWRF
CL

Nucleotide

• Length: 969 bp

>NTDB_id=73981 K5607_RS11000 WP_221047030.1 2519380..2520348(+) (comM) [Methylogaea oryzae strain E10]
ATGACCCTTGCCACCGTCTATAGCCGGGGCAAGCAAGGCATCCAAGCGCCGCTGGTGACGGTGGAGGCGCACCTGTCCAA
CGGCCTGCCCAGCCTGTCCATCGTCGGATTGCCGGAAGCGGCGGTCAAGGAAAGCAAGGACCGGGTGCGCAGCGCCCTGC
TCACCTGCCATTTCGAATTCCCGGCCCAACGCATCACCATCAACCTGGCGCCGGCCGATTTGCCCAAGGAAGGCGGACGC
TTCGACCTGGCCATCGCCGTGACCATCCTGGCCGCCTCCGGCCAGATCCGCCAGGCCGAATTGGGCCGCTACGAGTTGCT
GGGCGAACTGTCCCTCAGCGGCGAGCTGCGCCCCGCCAAGGGAGCCCTGCCCGTGGCCGTGGCGGCCCGCGATTGCGGCC
GCGCCTTGATCCTGCCCGGAAGCAACGCCGCCGAGGCCGCCCTGGCCGCCGGCGCGGAAATCCTGGCGGCCAATCACCTG
TTGGAAGTCTGCGGCCACCTCAACGGCGAGGCCCCCTTGCCGGAAACGCCCAGCGACCGGCCGTCCGCCCCGCCCGTCTT
CGACGTGGACCTGGCCGACGTGCACGGCCAATACCAAGCCAAGCGCGCCCTGGAAATCGCCGCCGCCGGCCGCCACAACC
TGCTCATGCTAGGCCCGCCCGGCACCGGCAAGTCCATGCTGGCGGCGCGTTTGCCGACCTTGCTGCCGGCACTGAGCGAA
GCGGAAGCCTTGGAAACCGCCGCCATCACCTCGGTCAGCGATCTACCCCTGGACCCCGGCCGCTGGCTGGCGCCGCCCTA
CAGGGCGCCGCACCATACGGCGTCCGCCGCCGCCCTGGTCGGCGGCGGTTGTCAGTTTTCGAAATTGCCGCGACGTTTTG
GAAATAGCTGCGACAACTTCGTAACCACCGAATCATATTCACCCGCAACGCCATCCTTGCTCGCACAAGGATGGCGTTTT
TGTTTGTGA

Domains

Predicted by InterproScan.

• Subunit ChlI of Mg-chelatase (ChlI) (21-142)

• Magnesium chelatase, subunit ChlI (Mg_chelatase) (190-285)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comM	Vibrio cholerae strain A1552	57.292	89.441	0.512
comM	Vibrio campbellii strain DS40M4	55.477	87.888	0.488
comM	Glaesserella parasuis strain SC1401	54.355	89.13	0.484
comM	Haemophilus influenzae Rd KW20	53.472	89.441	0.478
comM	Legionella pneumophila str. Paris	50.883	87.888	0.447
comM	Legionella pneumophila strain ERS1305867	50.883	87.888	0.447
RA0C_RS07335	Riemerella anatipestifer ATCC 11845 = DSM 15868	44.444	89.441	0.398