Detailed information NTG0737536

Bioinformatically predicted

Overview

• Name: pilU
• Type: Machinery gene
• Locus tag: MTS31_RS07120
• Genome accession: NZ_CP121563
• Coordinates: 1488501..1489619 (-)
• Length: 372 a.a.
• NCBI ID: WP_000347039.1
• Uniprot ID: -
• Organism: Acinetobacter baumannii strain RAB94
• Function: mediate the depolymerization of the type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1483501..1494619

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
MTS31_RS07090 (MTS31_07090)	-	1484330..1485178 (+)	849	WP_000336548.1	class II glutamine amidotransferase	-
MTS31_RS07095 (MTS31_07095)	-	1485431..1485886 (+)	456	WP_000782976.1	bacteriohemerythrin	-
MTS31_RS07100 (MTS31_07100)	-	1486039..1487106 (+)	1068	WP_002019572.1	hypothetical protein	-
MTS31_RS07105 (MTS31_07105)	-	1487106..1487429 (+)	324	WP_000442587.1	RnfH family protein	-
MTS31_RS07110 (MTS31_07110)	bamE	1487484..1487882 (-)	399	WP_001170994.1	outer membrane protein assembly factor BamE	-
MTS31_RS07115 (MTS31_07115)	fur	1487994..1488431 (+)	438	WP_001122847.1	ferric iron uptake transcriptional regulator	-
MTS31_RS07120 (MTS31_07120)	pilU	1488501..1489619 (-)	1119	WP_000347039.1	PilT/PilU family type 4a pilus ATPase	Machinery gene
MTS31_RS07125 (MTS31_07125)	pilT	1489647..1490684 (-)	1038	WP_000355489.1	type IV pilus twitching motility protein PilT	Machinery gene
MTS31_RS07130 (MTS31_07130)	-	1490811..1491503 (+)	693	WP_001108512.1	YggS family pyridoxal phosphate-dependent enzyme	-

Sequence

Protein

• Length: 372 a.a.
• Molecular weight: 41933.13 Da
• Isoelectric Point: 6.6944

>NTDB_id=737536 MTS31_RS07120 WP_000347039.1 1488501..1489619(-) (pilU) [Acinetobacter baumannii strain RAB94]
MDFNDLLNLMVEKKSSDLFITDGVAPSMKINGQIVPISKNSLSGEVIGQLLHSIMSEKQRREFAETRECNFAIMNREKTA
RFRVSAFQQRDMPGMVLRRIETKIPSIDDLQLPPVLKDLSMTKRGIIIFVGATGTGKSTSLASMISHRNHNSKGHIITIE
DPIEFIHEHAGCIITQREVGIDTDSFEIALKNTLRQAPDVILIGEIRSREVMDYAIGFAETGHLVLATMHANNANQALDR
IIHFFESDRHSQLYMDLSLNLKAMIAQQLIPTPDGNSRRAAIEILINSPLISDYIRKGEIHEIKDLMKRSRELGMQTFDQ
ALFDLYKAGQITYKDALKHADSPNDLRLTIKLADEGPDQLSDGKQHLTFDRQ

Nucleotide

• Length: 1119 bp

>NTDB_id=737536 MTS31_RS07120 WP_000347039.1 1488501..1489619(-) (pilU) [Acinetobacter baumannii strain RAB94]
ATGGATTTTAATGACTTGCTCAACCTGATGGTTGAAAAAAAATCTTCCGATCTCTTTATTACAGATGGCGTTGCGCCCTC
TATGAAGATTAACGGGCAAATTGTTCCAATTTCAAAAAACAGTCTTTCTGGGGAAGTGATTGGTCAACTGTTACATTCCA
TCATGAGTGAAAAACAACGCAGAGAATTTGCAGAAACTCGTGAATGTAACTTTGCCATTATGAACCGTGAAAAAACGGCG
CGTTTTCGTGTCAGTGCTTTTCAGCAGCGCGACATGCCGGGCATGGTACTACGTCGTATTGAAACCAAGATTCCTTCAAT
TGATGACTTGCAGTTACCGCCTGTACTTAAAGATTTATCGATGACCAAACGCGGCATTATTATTTTTGTAGGCGCGACAG
GCACAGGTAAATCTACTTCACTGGCTTCAATGATCAGCCATCGTAACCATAACTCTAAGGGCCATATCATTACCATTGAA
GACCCGATTGAGTTTATTCACGAACATGCAGGTTGCATCATTACTCAGCGTGAAGTCGGGATCGATACCGACTCATTTGA
AATTGCCTTGAAAAATACACTACGACAAGCGCCGGATGTGATCTTAATTGGTGAGATCCGTTCTCGTGAAGTCATGGACT
ACGCGATTGGCTTTGCTGAAACAGGCCATCTTGTATTAGCTACCATGCACGCTAACAACGCCAACCAAGCGCTCGACCGT
ATTATTCACTTTTTTGAAAGTGACCGTCATAGTCAGCTTTACATGGACTTGTCACTTAACTTAAAGGCAATGATTGCGCA
GCAGCTCATTCCAACACCAGATGGTAATTCACGCCGTGCAGCAATTGAGATTTTAATTAACTCACCATTAATTTCAGACT
ACATCCGTAAAGGTGAAATTCATGAAATTAAAGATTTGATGAAACGCTCACGTGAACTTGGTATGCAGACCTTTGACCAA
GCTTTATTTGATTTATATAAAGCTGGTCAAATTACCTACAAAGATGCACTTAAACATGCTGACTCACCGAACGATTTACG
TTTAACCATTAAACTTGCAGATGAAGGTCCTGATCAATTATCAGACGGGAAACAGCATTTAACTTTTGACCGCCAGTAA

Domains

Predicted by InterProScan.

• Type II/IV secretion system protein (T2SSE) (31-270)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilU	Acinetobacter baylyi ADP1	75.926	100	0.772
pilU	Pseudomonas stutzeri DSM 10701	69.565	98.925	0.688
pilU	Vibrio cholerae strain A1552	53.243	99.462	0.53
pilT	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	42.486	93.011	0.395