Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   OCJ37_RS05710 Genome accession   NZ_CP106869
Coordinates   1377267..1377668 (+) Length   133 a.a.
NCBI ID   WP_003472648.1    Uniprot ID   A0A6N7QCN8
Organism   Xanthomonas sp. AM6     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 1372267..1382668
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OCJ37_RS05700 (OCJ37_05700) - 1375194..1376075 (-) 882 WP_263112714.1 energy transducer TonB -
  OCJ37_RS05705 (OCJ37_05705) gshB 1376072..1377022 (-) 951 WP_263112715.1 glutathione synthase -
  OCJ37_RS05710 (OCJ37_05710) pilG 1377267..1377668 (+) 402 WP_003472648.1 twitching motility response regulator PilG Regulator
  OCJ37_RS05715 (OCJ37_05715) - 1377686..1378048 (+) 363 WP_145702163.1 response regulator -
  OCJ37_RS05720 (OCJ37_05720) - 1378050..1378580 (+) 531 WP_263112716.1 chemotaxis protein CheW -
  OCJ37_RS05725 (OCJ37_05725) - 1378621..1380657 (+) 2037 WP_263112717.1 methyl-accepting chemotaxis protein -

Sequence

Protein


Download         Length: 133 a.a.        Molecular weight: 14643.95 Da        Isoelectric Point: 6.3483

>NTDB_id=736183 OCJ37_RS05710 WP_003472648.1 1377267..1377668(+) (pilG) [Xanthomonas sp. AM6]
MSENTTAGGELAGLRVMVIDDSKTIRRTAETLLKREGCEVVTATDGFEALAKIADQQPQIIFVDIMMPRLDGYQTCALIK
GNQLFKATPVIMLSSKDGLFDKARGRIVGSEQYLTKPFTREELLGAIRTYVNA

Nucleotide


Download         Length: 402 bp        

>NTDB_id=736183 OCJ37_RS05710 WP_003472648.1 1377267..1377668(+) (pilG) [Xanthomonas sp. AM6]
ATGAGTGAAAACACGACTGCGGGTGGGGAACTCGCAGGACTGAGGGTCATGGTGATCGATGACTCGAAGACGATCCGCCG
TACCGCCGAAACGCTGTTGAAGCGCGAGGGTTGCGAGGTGGTCACCGCCACCGACGGGTTCGAGGCCCTGGCCAAGATCG
CCGACCAGCAGCCGCAGATCATCTTCGTGGACATCATGATGCCGCGGCTGGACGGCTATCAGACCTGCGCGCTGATCAAG
GGCAACCAGCTGTTCAAGGCGACGCCGGTGATCATGCTGTCCTCCAAGGACGGCCTGTTCGACAAGGCGCGCGGCCGCAT
CGTCGGTTCCGAGCAGTACCTCACCAAACCCTTCACACGCGAAGAACTGCTGGGCGCGATCCGTACATACGTCAACGCCT
GA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(16-127)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A6N7QCN8

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

74.38

90.977

0.677