Detailed information NTG0731585

Bioinformatically predicted

Overview

• Name: pilM
• Type: Machinery gene
• Locus tag: N5P21_RS02840
• Genome accession: NZ_CP104727
• Coordinates: 641870..642934 (+)
• Length: 354 a.a.
• NCBI ID: WP_253391055.1
• Uniprot ID: -
• Organism: Pseudomonas citronellolis strain G5.80
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 636870..647934

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
N5P21_RS02820 (N5P21_02820)	-	637050..637472 (+)	423	WP_116424166.1	hypothetical protein	-
N5P21_RS02825 (N5P21_02825)	-	637516..638286 (+)	771	WP_261747449.1	class I SAM-dependent methyltransferase	-
N5P21_RS02830 (N5P21_02830)	-	638348..638839 (+)	492	WP_074985605.1	M48 family metallopeptidase	-
N5P21_RS02835 (N5P21_02835)	-	639252..641684 (-)	2433	WP_116424167.1	penicillin-binding protein 1A	-
N5P21_RS02840 (N5P21_02840)	pilM	641870..642934 (+)	1065	WP_253391055.1	pilus assembly protein PilM	Machinery gene
N5P21_RS02845 (N5P21_02845)	pilN	642934..643533 (+)	600	WP_009613648.1	type 4a pilus biogenesis protein PilN	-
N5P21_RS02850 (N5P21_02850)	pilO	643530..644186 (+)	657	WP_261747450.1	type 4a pilus biogenesis protein PilO	-
N5P21_RS02855 (N5P21_02855)	pilP	644183..644707 (+)	525	WP_074985598.1	type 4a pilus biogenesis lipoprotein PilP	-
N5P21_RS02860 (N5P21_02860)	pilQ	644764..646851 (+)	2088	WP_074985595.1	type IV pilus secretin PilQ	Machinery gene
N5P21_RS02865 (N5P21_02865)	aroK	646860..647378 (+)	519	WP_074985632.1	shikimate kinase AroK	-

Sequence

Protein

• Length: 354 a.a.
• Molecular weight: 37759.07 Da
• Isoelectric Point: 4.4486

>NTDB_id=731585 N5P21_RS02840 WP_253391055.1 641870..642934(+) (pilM) [Pseudomonas citronellolis strain G5.80]
MLGLFTKKANTLLGIDISSTSVKLLELSRSGGRYKVEAYAVEPLPPNSVVEKNIAELEGVGQALSRVVAKARTGVKTAAV
AVAGSAVITKTIEMDGGLSDDELENQLKIEADQYIPYPLEEVAIDFEVQGVSARNAERVDVLLAACRKENVEVREAALAL
AGLTAKVVDVEAYALERAFGLLGDQLGGNADELTVAVVDIGATMTTLSVLHHGRTIYTREQLFGGRQLTEEIQRRYGLSV
EEAGLAKKQGGLPDDYDSEVLQPFKDAVVQQVSRSLQFFFAAGQFNDVDYILLAGGTASIPDLDRLIQQKIGTPTLVANP
FADMVLSNKVNAGALASDAPALMIACGLAMRSFD

Nucleotide

• Length: 1065 bp

>NTDB_id=731585 N5P21_RS02840 WP_253391055.1 641870..642934(+) (pilM) [Pseudomonas citronellolis strain G5.80]
GTGCTAGGGCTCTTCACTAAGAAAGCGAACACACTGCTGGGGATCGACATCAGTTCGACTTCGGTCAAACTCCTCGAGTT
GAGCCGTTCGGGCGGGCGCTACAAGGTAGAGGCCTACGCCGTAGAGCCGCTCCCGCCGAACTCGGTGGTCGAGAAGAACA
TCGCCGAACTGGAGGGGGTCGGCCAGGCGCTGTCGCGGGTGGTCGCCAAGGCGCGCACCGGCGTGAAGACGGCTGCCGTG
GCGGTCGCCGGCTCGGCGGTCATCACCAAGACCATCGAGATGGACGGCGGGCTTTCCGACGATGAGCTGGAGAACCAGCT
CAAGATCGAGGCCGACCAGTACATTCCCTATCCCCTGGAGGAGGTCGCCATCGACTTCGAGGTCCAGGGCGTATCCGCGC
GCAACGCCGAGCGCGTCGACGTGCTGCTGGCGGCCTGCCGCAAGGAGAACGTCGAGGTGCGCGAGGCCGCGCTGGCCCTG
GCCGGGCTCACCGCCAAGGTGGTGGACGTCGAGGCCTACGCGCTGGAGCGTGCCTTCGGCCTGCTCGGCGACCAGCTGGG
CGGCAACGCCGACGAGCTGACCGTCGCGGTGGTCGACATCGGCGCCACCATGACCACTCTCAGCGTCCTGCACCACGGCC
GCACCATCTATACCCGCGAGCAGCTGTTCGGCGGGCGCCAGCTCACCGAGGAGATCCAGCGCCGCTACGGCCTGTCGGTG
GAGGAAGCCGGCCTTGCCAAGAAGCAGGGCGGTCTTCCGGATGACTACGACAGCGAAGTGTTGCAACCGTTCAAGGATGC
GGTGGTGCAGCAGGTTTCGCGTTCGCTGCAGTTCTTCTTCGCCGCGGGCCAGTTCAACGACGTCGACTACATCCTGCTCG
CCGGCGGCACGGCTTCCATTCCCGACCTGGACCGGCTCATCCAGCAGAAGATCGGCACCCCGACGCTGGTGGCCAACCCC
TTCGCCGACATGGTGCTGAGCAACAAGGTGAATGCCGGGGCGCTGGCCAGTGACGCGCCGGCGCTGATGATTGCCTGCGG
TCTGGCGATGAGGAGTTTCGACTGA

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (14-353)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilM	Acinetobacter baumannii D1279779	57.627	100	0.576
comM	Acinetobacter nosocomialis M2	57.627	100	0.576
comM	Acinetobacter baylyi ADP1	53.672	100	0.537
pilM	Legionella pneumophila strain ERS1305867	46.328	100	0.463